Trinickia caryophylli: U0034_14455
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Entry
U0034_14455 CDS
T09722
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_14455
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_14455
BRITE hierarchy
Motif
Pfam:
TamB
AsmA_1
AsmA_2
NeA_P2
DUF6524
Motif
Other DBs
NCBI-ProteinID:
WQE10964
LinkDB
All DBs
Position
1:3189935..3194047
Genome browser
AA seq
1370 aa
AA seq
DB search
MTNESSPTPSDDAQRGDEPHPPRRPRPPRRGRRVLRGLGIAVFALVALALAAVLALYGAV
TTERGTRLVWRAAVAVSGGRLTGTLEGGTLAQGLRLSDVHWAQPGPGGGTDIRIDRLSGR
WALTRAPWRFTIEDLSARTIEARLAPSQNNAPMVLPQSLRLPLELDIRSVYVGKLRLIDG
KSAAEYGGLRLAGRSDGRHHTLSLGSLDTPYGAVDARLALDGVRPFALSGDARYAGKLEN
EPVSVAARLGGTLEALSADIDATGFKLKGRAHVEAKPFASVVLERATLSFAHVDPRAFSP
GAPAADLSLDAQIAPVPGAGTFTVAGPVSIVNARPGRLDAGLLPLIDARAEVRLDAREER
IAGLRIRLVDDATLVGGGTLRRGRGRIDLQAAGLDLNTLAPAVRPTALEGPIGITLDGPT
QALEFDLADKRAGLGARAKVSLEPSRIALRDVRVTAGAGRAELEGTLARDAESRYSLRAT
LAAFDPRLVLAATQAGAKTRAAAAARRTAAVKPRASASGSPTKPGMRASTSKQAVTGVTA
WPEARVTGTFAAEGALAPVLTTKLRFALGPSVYDGLPLTGAGTLQVVGQRLLPSEARLSI
AGNDVELNGSFGTAADRLRFHVAAPHLERLGFGVAGAVLADGDVTGSLAHPNVTLSYDAR
GVAFGENRVGSAQGRALLRDGANGALELTTQARDVHTGIADLAALSAHVTGTRARHAFDA
SAKGTLRGRPIDLALAASGGLADTRDGPRWSGTVTRLTNTGMPALELQAPLSVTAARDLV
SLGATRLALEGARLDLRSLAYDHGTLRSAGSVSALSVARLLAIREELTGTPSRVRSDLVF
AGDWDFSLGRTATGYARLARVSGDLSVDTGRGGLAPLGITALAARAEFGAGNRLAATLHA
AASRIGTADARVGLPLTPDRARGGLLGVSADAPLDGTIAADVPSLKTTGGLFGPSYLLDG
RLALKLAVAGTAAKPALSGSLTGDSLSATFVDQGVQLKDGVIRIALSENLVDFQRVEFHG
GDGTLRATGKIRLDAAEPDLTAQIVADKLALFAAPDRQLSLSGSATVANGGAAGGIDIDG
RFRVDHALFDMPEQPAPQLSDDVVIVRNNAVVRGSPPPMEPAMNKPVGRFAPRANVDIDL
GRDFRFRGRGADLGLRGTVTMLSAPNQPLRAVGNVRVTEGSTYTQFGRKLGIENGYFTFN
GPVANPGVNILAMRRNQEVEAGVQVTGTVNTPAVKLVSEPNVPDDEKLSWLLFGHGTDQG
NNLGQQSSMTTALALLGSATGKRVAQTFGLDEFTVGRSDVGLTDPEVIMISKAINERLVF
GYEQGLQSASNAFKATINLSRFWSVSAYTGTFQGVDIDFTRRFDGFGSRR
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgaatcgtctccaacgccttccgacgacgcgcagcgcggcgatgagccgcat
ccgccgcgccggccgcgcccaccgcgccgtgggcgtcgcgtgctgcgcgggttgggaatc
gcggtgttcgcgctcgtcgcactcgcgctggcggccgtcctcgcgctctatggcgcggtg
acgaccgagcgcgggacgcgccttgtctggcgcgccgccgtagccgtatcgggcggccgg
ctcacgggtacgctcgaaggcggcacgctcgcacaggggctgcggctctccgatgtgcac
tgggcgcagcctggccccgggggcggtaccgatatccgcatcgataggctgagcggacgt
tgggcactcacgcgcgcgccgtggcggttcacgatcgaggatttgtcggcccgcacgatc
gaggcgcggctcgcgccgtcgcaaaacaatgcgccgatggtgctgccgcagagcctgcgg
ctgccgctcgaactcgatatccgctcggtttatgtcggcaagctccgtctcatcgacggc
aagagcgcggcagagtacggcggcctgcgcctcgccggccgcagcgacggccgtcaccac
acactgtcgctcgggagtctcgacacgccgtacggcgccgtcgacgcgcggctcgcgctc
gacggcgtgcggccgttcgcgctttctggcgatgcccgctatgcgggcaagctcgagaac
gaacctgtgagcgtggcggcccgcctcggtggcacgctcgaggcgttgagcgccgatatc
gacgcgacggggttcaagctcaaagggcgcgcacatgtcgaggcgaagccgttcgcgagc
gtcgtgctcgaacgtgccacgctttcgtttgcccatgtcgatccgcgtgcattcagcccg
ggcgcgcctgccgcggacctttcgctcgatgcgcagatcgcgcctgtgccgggcgccggc
acgttcaccgtcgcgggcccggtgtcgatcgtcaacgccaggccggggcggctcgatgcc
gggctcttgccgctcatcgatgcacgcgccgaggtccggctcgacgcccgcgaggagcgg
atcgccgggctgcggatccggcttgtcgacgacgcgacgctcgtgggcggcggcacgctg
cgaagggggcgcgggcgcatcgatctgcaggcggcggggctcgatctgaacacgctggcg
ccagcggtcaggccgactgcgctcgaaggcccgatcggcatcacgctcgacgggccgacg
caggcgctcgagttcgacctcgcggacaagcgcgctggtctcggtgcgcgtgcgaaggtg
tcgctcgagcccagccgtatcgcactgcgcgacgtacgcgtgacggcgggcgcggggcgc
gccgagctcgaggggacgttggcgcgcgacgccgagagccgctattcgctgcgtgcgacg
cttgccgcgttcgacccgcgcctcgtgctggcggcgacgcaggcaggcgcgaaaacgcgg
gccgcggccgcggctcgccgtacggccgccgtgaaaccgcgtgcgtcggcgtccggctcg
ccgactaagcctggcatgcgcgcgagcacctcgaagcaggctgtgaccggggtgacggcg
tggcctgaggcgcgcgtgaccggcacgttcgcggcagaaggcgcgctcgcgccggtgctg
acgacgaagctgcgcttcgctctggggccgagcgtgtacgacggcctgccgctcacggga
gcgggtacgctgcaggtggtggggcagcggctcctgccgagcgaggcacggctgtccatc
gcgggcaacgacgtggagctgaacggcagcttcggcacagcggcggatcgcctgcgcttt
catgtggctgcgccgcacctcgagcggctcggctttggcgtcgcgggcgcggtgcttgcg
gacggcgacgtgaccggctccctcgcgcatccgaacgtgacgctttcgtacgacgcgcgc
ggtgtggcgttcggcgagaaccgtgtcggctcggcccaggggcgggcgctccttcgcgac
ggtgcgaacggcgcgctcgaactgaccacgcaggcgcgggatgtgcatacgggtatcgcc
gatctcgcggcgctgtcggcccacgtcaccggcacgcgcgcgcggcatgcattcgacgcg
agtgccaagggcacgctgcgtggccggccgatcgatctggcgctcgcggcgtctggtggc
ctcgccgatacgcgcgacgggccgcgctggagcggtacggtcacgcggctgacgaacacg
ggcatgccggcgctggaactgcaggccccgctcagcgtgacggccgcgcgcgacttggtt
tcgctcggcgcgacgcgcctcgccctcgagggcgcgaggctcgatctgcgctcgctcgcc
tacgatcatggcacgctgcgttcggccggctcggtttcggcgttatcggtggcccgcctg
ctcgcgatccgcgaggaattgacaggcacaccgtcgcgcgtgcgaagcgacctcgtcttt
gcgggcgactgggacttctcgctcgggcgtacggcaaccggctatgcgcgtcttgcccgc
gtgagcggcgacttgtcggtggatacgggccgcggcgggctggccccgctcggcatcacg
gcgctggcggcgcgcgccgagttcggcgccggcaatcgtctcgccgctacgctgcatgcg
gcggcgagccggatcggcaccgccgacgcgcgcgtgggcctgccgctcacgcccgatcgg
gcgcgcggcggtctgctcggcgtttcggccgatgcgccgctcgatggaacgatcgcggcc
gacgtcccgtcgctgaagacgacgggcggcctcttcgggccgagctatctgctcgacgga
cgcctcgcgctgaagctggcggtggccggcacggcggccaagcccgcgctctcgggttcg
ctgacgggcgattcgctctcggcgacgttcgtcgaccagggtgtgcagttgaaagacggc
gtgattcgcattgccctgtccgaaaacctcgtcgattttcagcgcgtcgaattccacggc
ggcgacgggacgctgcgcgcgacgggcaagattcggctcgatgccgccgagcccgatctg
acggcacagatcgtggccgacaaactggcgctcttcgcggcacccgatcggcaactgtct
ctgtcgggcagcgcgacggtggccaatggcggcgcggccggcggcatcgacatcgacggc
aggttccgcgtcgatcacgcgctcttcgatatgccggagcagccggcgccgcaactgtcc
gacgacgtggtgatcgtgcgcaacaatgccgtggtgcggggctctcctccgccgatggag
ccggcgatgaacaaaccggtcgggcgctttgcgccgcgcgccaacgtcgacatcgacctt
gggcgtgacttccgcttccgggggcgcggcgcggatctgggcctgcgcggcacggtgacg
atgctgtccgcgccgaaccagccgttgcgcgcggtgggcaacgtgcgcgtgaccgaaggt
tcgacctatacgcaattcggtcgcaagctcgggatcgaaaacggctacttcacgttcaat
ggcccggtggcgaatcctggcgtcaacatccttgccatgcggcgcaatcaggaagtcgaa
gcgggcgtgcaggtgacgggtaccgtcaacacgccggccgtgaagctcgtgtccgagccg
aacgtacctgacgacgaaaagctctcatggctgctgttcggccacggtacggaccagggc
aacaacctcggccagcaaagctcgatgacgacagcgcttgctctgctcggcagcgcaacg
ggcaagcgcgtggcgcagacgttcgggctcgacgaattcaccgtcggccgcagcgacgtg
ggcttgaccgatccggaagtcatcatgatttcgaaggccatcaacgagcggctcgtattc
ggctacgaacaagggctgcagtcggcaagcaacgctttcaaggcgactatcaacctgtcg
cgcttctggtcggtttccgcttatacgggtacgttccagggagttgatatcgatttcaca
cgtcgtttcgacggttttggatcacggcggtga
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