Trinickia caryophylli: U0034_14490
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Entry
U0034_14490 CDS
T09722
Name
(GenBank) arginine/lysine/ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00330
Arginine and proline metabolism
tcar01100
Metabolic pathways
tcar01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
U0034_14490
Enzymes [BR:
tcar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
U0034_14490
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WQE10971
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All DBs
Position
1:3201033..3203312
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AA seq
759 aa
AA seq
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MKFRFPVVIIDEDFRSENISGSGIRALAEAIQGEGVEVLGLTSYGDLTSFAQQSSRASCF
ILSLDDDELMLGETGPDGELPELATAILELRAFVTEVRRRNADIPIFLYGETRTSRHLPN
DILRELHGFIHMFEDTPEFVARHIVREAKVYLDSLAPPFFKELVKYADEGSYSWHCPGHS
GGVAFLKSPLGQMFHQFFGENMLRADVCNAVDELGQLLDHIGPVAASERNAARIFSADHL
FFVTNGTSTSNKIVWHATVAPGDIVVVDRNCHKSILHAITMTGAIPVFLTPTRNNFGIIG
PIPLDEFRPENIRKKIEANPFAREALQKNPNLKPRILTITQSTYDGVVYNVEMIKDLLGD
FLDTLHFDEAWLPHAEFHPFYQDMHAIGAGRPRTGALVFATHSTHKLLAGISQASQIVVQ
DSVDGVFDRHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEALDFRR
AMRKVDAEYGEDWFFQVWGPEALADEGIGSREDWVLRANDPWHGFGPLAEGFNMLDPIKA
TIVTPGLDLAGDFAETGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVT
ELQQFKDDYDSNQPLWRVLPEFVAQHPAYERMGLRDLCQAIHSVYRANDIARLTTEMYLS
NMEPAMKPSDAFAKLAHREIDRVPIDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNY
LKFAREFNERFPGFSTDIHGLVAEPVNGRVEYFVDCVRG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgtttccccgtcgtcatcatcgacgaagactttcgctccgagaacatctcg
ggttccggcatccgggcgcttgccgaggcgatccagggggagggggtggaggtgctcggc
ctgacgagctacggggacctcacctcgttcgcgcagcagtcgagccgcgcgtcgtgcttt
atcctgtcgctggacgacgacgagctgatgctcggtgagacgggccccgacggcgagcta
cccgaactcgccacggcgatcctcgaattgcgtgcgttcgtgaccgaagtccgccgccgc
aatgccgacattccgatctttctctacggcgagacgcggacgtcgcgccatttgccgaac
gacatcctgcgcgagctgcatgggttcatccacatgttcgaggacacgcccgagttcgtc
gcgcgccatatcgtgcgcgaagcgaaggtctatctcgattcgctcgcgcccccgttcttc
aaggagctcgtcaagtacgccgacgaaggctcgtactcgtggcactgcccgggccattcc
ggcggcgtggcgtttctgaagagcccgctcggccagatgttccaccagttcttcggcgag
aacatgctgcgcgccgacgtgtgcaacgccgtggacgagctcggccaactgctcgaccat
atcggcccggtggctgcctccgagcgcaacgccgcgcgcatcttcagcgccgatcatctc
tttttcgtcaccaacgggacgtcgacctcgaacaagatcgtctggcatgccaccgtggcg
ccgggcgatatcgttgtcgtcgatcgcaactgccacaagtcgatcctgcatgcgatcacg
atgacgggcgcgattcccgtgtttctcacgcccactcgcaacaacttcggcatcatcggc
ccgatcccgctcgacgagtttcgtcccgagaacattcgcaagaaaatcgaggcgaacccg
ttcgcgcgcgaagcgctgcagaagaacccgaacctcaagccgcgcattctgacgatcacg
cagagcacgtatgacggcgtggtctacaacgtcgagatgatcaaggatctgctcggcgat
ttcctcgatacgctgcatttcgacgaggcctggctgccgcacgccgaattccatccgttt
taccaggacatgcatgcgatcggcgcgggccgcccgcgcaccggcgcgctcgtgttcgcg
acgcattcgacgcacaagctgcttgccggaatctcgcaggcatcgcagatcgtcgtgcag
gattcggtggacggggtgttcgaccgccatcgcttcaacgaggcgtacctcatgcatacg
tccacgagcccgcagtacgcgatcattgcgtcgtgcgacgtcgcggccgcgatgatggag
ccgccgggcggcacggcgctcgtcgaggaatcgatcgccgaggcgctcgatttccgccgc
gcgatgcgcaaggtggacgcggagtacggcgaagactggttcttccaggtctgggggccg
gaggccctcgccgacgaaggcatcggttcgcgcgaggactgggtgctgcgtgcgaacgac
ccgtggcacggcttcggcccgctcgccgagggcttcaacatgctcgatccgatcaaggcg
acgatcgtcacgccagggctcgaccttgcgggcgacttcgccgagacgggtattcccgca
gcgatcgtcacgaagtatctggccgagcacggcatcatcgtcgagaagacgggcctctac
tccttcttcatcatgttcacgatcggcattacgaagggccgctggaactcgatggtgacg
gagctgcagcagttcaaggacgattacgacagcaaccagccgctttggcgcgtcctgccc
gagttcgtggcgcagcatccggcctacgagcgcatgggcctgcgcgatctgtgccaggcg
attcacagcgtttatcgcgcgaacgacatcgcacggctcacgaccgagatgtacctctcg
aacatggagccggccatgaagccgtcggacgcatttgccaagctcgcccaccgcgagatc
gaccgggtgccgatcgacgaactcgaaggccgtgtgacgagcattctgctcacgccatat
ccccccggcatccccctcctgattccgggcgagcgcttcaacaagacgatcgtcaattat
ctgaagttcgcgcgcgagttcaacgagcgcttcccgggcttctcgacggacattcacgga
ctcgtggccgaaccggtcaacgggcgcgtcgaatacttcgtcgattgcgtgcgcggctga
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