Trinickia caryophylli: U0034_14585
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Entry
U0034_14585 CDS
T09722
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_14585
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_14585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WQE10988
LinkDB
All DBs
Position
1:3229388..3232102
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AA seq
904 aa
AA seq
DB search
MKPTALGSAIRSIVWAEVALTAALGTSAYAQTPPAGTGVAAEQTGSTAAAVPAPGTASGG
QTVKKLDKFEVTGSLIRTSDKVGHTEVQVITAKEIQQSGYTTVADFLRSTSANSASSWGQ
TTMNSSAPGGAGMALRGLSEKYTLVLVDGQRVANYAQSVNFTDTFFDVNAIPLNMVERVE
IVKTGAVSVYGSDAIAGVVNIITKKNFQGLQIDGQLGKAQHPGDGQGNFSVLAGFGDLNS
DRFNVTAAASYYRDSGSTLGDRDMTSAQDFTQYPGGLAAPLGPNQQSYWSLADGSKVPLS
PCPPGSTTSATNCTYNTAASTSLVPSTTRLNAKVRGTFKIDDNTQAYAGFWVSRDETVQL
QGPASISSTTNIYNPSTGSVSPLPRTVSASNPYNPFGVPTAINLTFPGNVVEADTVSTFW
MANTGVKGSFDAGKFGAWDWSADYGHSQSTVDTTYHNRLNVAGLENMLANGTYNFSNPAS
TPNGLNGVFTDDDQQAISKVDSVTAKASTSNLFTLPGGAVGLGVGTEFRHESSTINPQTL
AAQGVSAPANVQTVEGSRNVAAAFYQIDIPILRNLTFTQAGRYDHYSDFGGAFSPSFALR
FQPVQMLTAYASYSRGFRAPTLVENSQAVYLAHQNLVDPNDPSGVPTKHFTTERVAGNPN
LQPEHTKNYNIGFQLSPDSTTDIGAAFYKVRIDGVIGTDDPNAVLVANDPSRVVRNPDGS
VRYLVQQFVNLGALDTDGFDFNFRKALRTKYGTFTLAGDWAYVWHFKLHSPGAATQDFAG
NNLALLQPFGASNPRWKGNTSLSWDYRQLTTTLTWQYTGPYTNAVAAEFGDGGTGSVASY
SQFNLMFNYRGFKHWTIYGGVTNLFDKKPPFDVEWQAVPDITGYDQSLYTDLGRFFQIGA
TYRF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaacggctttgggatcggcaatacgcagcatcgtatgggctgaagtcgcgttg
acggcggctttgggtacctccgcttacgcgcagacgccgcctgccggcacgggtgtcgcc
gccgagcaaaccggcagcaccgccgcagccgtgccggcgccgggcaccgcgtcgggcggg
cagaccgtaaaaaagctcgacaagttcgaagtgacgggctcgctgatccgcacatcggac
aaggtcggccacaccgaagtgcaggtaatcaccgcgaaggaaatccagcaaagcgggtac
accacggtggccgactttctgcgctcgacctcggccaattccgcgagcagctggggccag
acgacgatgaacagctcggccccgggcggcgccggcatggcgttgcgcgggctcagcgag
aaatatacgctcgtgctcgtcgacggccagcgcgtcgcgaactatgcgcagtcggtcaac
ttcaccgacaccttcttcgacgtgaacgcgatcccgctgaacatggtcgagcgcgtcgaa
atcgtcaagaccggcgcggtatccgtctatggttcggacgccatcgcgggcgtcgtcaac
atcattacgaagaagaactttcagggcctgcagatcgacggtcaactcggcaaggcgcag
cacccgggcgacggccagggcaacttcagcgtgctggccggcttcggcgacctgaattcg
gaccgcttcaacgtcacggcggccgccagctactatcgcgattccggctcgacgctcggc
gatcgcgacatgacgtcggcgcaagacttcacgcaatatccgggtgggctcgccgcgccg
ctcggccctaaccagcaatcgtactggtcgctcgcggacggctcgaaggtgccgctttca
ccgtgcccgccgggcagcacgacgagcgcgaccaactgcacctacaatacggccgcctcg
acctcgctcgtcccctccaccacgcgcctgaacgcgaaggtgcgcggcaccttcaagatc
gacgacaacacgcaggcctatgcgggcttctgggtgagccgcgacgaaaccgtgcagctg
caggggccggcctcgatttcgagcacgacgaacatttacaacccgtcgacgggctccgtt
tcgccgttgccgcgcacggtttcggcgagcaacccctacaacccgttcggcgtaccgacg
gcgatcaacctgaccttcccgggcaacgtcgtagaggccgatacggtatcgacgttctgg
atggcgaacacgggcgtcaaaggctcgttcgacgcgggcaagttcggcgcgtgggactgg
tccgccgattacggccattcgcagagcaccgtcgatacgacgtatcacaaccggctgaac
gtggcgggcctcgagaacatgctcgccaacggcacgtacaacttctcgaacccggcctcc
acgccgaacggcctgaacggcgtcttcaccgacgacgatcagcaggccatctcgaaggtc
gacagcgttaccgccaaggcctcgacgtcgaatctcttcacgctgccggggggcgcggtc
ggcttgggcgtgggcaccgagttccggcacgaatcgtcgacgatcaacccgcaaacgctc
gcggcgcagggcgtatcggcgcccgcgaacgtacagacggtggagggctcgcgcaacgtc
gccgcggcgttctaccagatcgacatcccaattctgcgcaacctgacgttcacgcaggcg
ggtcgctacgatcattacagcgacttcggcggcgcgttctcgccgagcttcgcgctgcgc
ttccaaccggtgcagatgctcacggcgtatgcatcgtacagccgcggtttccgtgctccg
acgctcgtcgaaaactcgcaggccgtctatctggctcaccagaacctggtcgatccgaat
gacccgagcggcgtaccgacgaagcacttcacgaccgagcgggtcgcgggcaatcccaac
cttcagcccgagcacaccaagaactacaacatcggcttccagctctcgcccgactcgacg
accgatatcggcgcggcgttctacaaggtccgcatcgacggcgtgatcggcaccgacgat
ccgaacgcggtgctcgtcgccaacgatccctcccgcgtcgtgcgcaatccggacggctcg
gtgcgctacctcgtgcagcagttcgtgaacctcggtgcgctcgacaccgatgggttcgat
ttcaacttccgcaaggcgctgcgcaccaagtacggcacgttcacgctcgcgggcgactgg
gcttatgtctggcacttcaagctgcacagccccggtgccgccacgcaggacttcgccggc
aacaacctcgcgctgctgcagcctttcggcgcgagcaacccgcgctggaagggcaatacg
agcctgagctgggattaccggcaactgaccaccacgctgacgtggcaatacacggggccc
tatacgaacgccgtggccgcggaattcggcgacggcggcacgggctcggtggcgtcgtac
agccagttcaacctgatgttcaactatcgcggcttcaagcattggacgatctacggcggc
gtcacgaacctcttcgacaagaagccgccgttcgacgtcgagtggcaagccgtgcccgac
atcaccggctacgaccagtcgctctacacggacctcggccgcttcttccagatcggggcg
acttaccggttctga
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