Trinickia caryophylli: U0034_15215
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Entry
U0034_15215 CDS
T09722
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcar03019
]
U0034_15215 (rng)
03009 Ribosome biogenesis [BR:
tcar03009
]
U0034_15215 (rng)
Messenger RNA biogenesis [BR:
tcar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U0034_15215 (rng)
Ribosome biogenesis [BR:
tcar03009
]
Prokaryotic type
rRNA processing factors
U0034_15215 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
WQE11104
LinkDB
All DBs
Position
1:complement(3369995..3371458)
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AA seq
487 aa
AA seq
DB search
MNEEILINVTPQETRVALVQQAAVQELHIERTASRGRVGNVYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRAAGEHASPPQPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQVS
IAGRTLVYLPQEPHIGVSQKIEDEAEREAIRARLTAVLPADEKGGYIVRTIAEDATSEEL
AGDVAYLRKTWATVVAQAQRLPPTSLLYQDLNLAQRVLRDFVNDETTRIQVDSRETYQML
SEFATEFTPAVSAKLQHYTGERPLFDLYNVETEIQRALSRRVDLKSGGYLMIDQTEAMTT
IDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENVEHRDAVLG
ELKKALSRDRTRSTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCEGKGQVKTARTVCY
DVLREILRESRQFNPREFRVVASQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLSQE
QYDIVLM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagagatcctgatcaacgtcactccgcaggaaacgcgcgtcgcgctggtccag
caagccgccgtgcaggagctgcacatcgaacgcacggcatcgcgcgggcgtgtcggcaac
gtctacctgggcaaggtcgtgcgcgtgctgccgggcatgcagtcggcattcatcgacatc
ggcctcgaacgggccgcgttcctgcatgtggccgatatctggcagccgcgagccgccggg
gaacatgcaagcccgccgcagccgatcgagaagaccgtgttcgagggccagacgctgatg
gtccaggtcatcaaggacccgatcggtacgaaaggcgcccgcctctccacacaggtcagc
atcgcgggacgcacgctcgtctatctcccgcaggagccgcacatcggcgtctcgcagaaa
atcgaagacgaagccgagcgcgaggcgatccgcgcgcgcctcaccgcggtgctgccggcc
gacgagaaaggcggctacatcgtgcgcacgatcgccgaagatgccacgagcgaagaactc
gcgggggacgtcgcctatctgcgcaagacctgggcgacggtggtggcgcaggcgcagcgg
ctgccgcccacgagcctgctctatcaagacctcaatctcgcgcagcgcgtactgcgcgat
ttcgtcaacgacgagacgacccgtatccaggtcgattcgcgcgagacttatcagatgctg
agcgagttcgccaccgagttcacgccggctgtcagcgccaaactgcagcactataccggc
gagcggccgctcttcgatctctacaatgtcgagaccgagatccagcgtgcgctgtcccgg
cgcgtcgatctgaagtcgggcggctatctgatgatcgaccagaccgaggcaatgacgacg
atcgacgtgaataccggcggctatgtcggcgcgcgcaacttcgacgacaccatcttcaag
acgaacctcgaggcggcgcataccatcgcccggcaactgcggctgcgcaatctcggcggg
atcatcatcatcgacttcatcgatatggagaatgtcgagcaccgcgatgcggtactcggc
gagttgaagaaggcactgtcgcgcgatcgaacacgctccactgtgaatgggttctcgcaa
ctggggctcgtggagatgacgagaaagcgcacgcgcgaatcgctcgcgcacgtgctgtgc
gagccctgccccgtatgcgagggcaaggggcaggtcaagaccgcgcgtacggtgtgttac
gacgtgctgcgcgagatcctgcgcgaatcgcggcagttcaatccgcgcgaatttcgcgtc
gtggcctcgcagcaggtgatcgatctttttctcgacgaagaatcccagcatcttgcgatg
ctgatcgacttcatcggcaagcccgtgtcgttacaggtcgagtcgaacctgagtcaggag
cagtacgacatcgtgctgatgtaa
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