Trinickia caryophylli: U0034_15395
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Entry
U0034_15395 CDS
T09722
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_15395
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_15395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_15395
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
U0034_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
WQE11136
LinkDB
All DBs
Position
1:3405751..3407079
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AA seq
442 aa
AA seq
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MGRWISRVAAVAVLGAWAIAAAAAGGEGGAGTGAAEPVRLALVEGMSGPFADAGAAVERN
LRFGVERVNARGGVTLADGRHPLELVVMDSRGGVEEALVQQRAAADRRIPFILQGNGSAV
AAALVAAIDKHNAREPGNRELFLNYSADDPALTGAGCSFWHFRFDAHAGMRMNALADVIA
GERAVKKVYLLNQDYSFGHDVSALARESLAARRPDIAVVGDEFHPIGRVKDFTPYLAKIR
ASGADAVVTGNWGNDLTLLVKAAREQGYVGKFYTFYGNSLGAPAALGDAGVKRVVAVADW
HPNAGASALFADRASGAKPALSDAYYAAFRARFPAARDDYPVLRMEIMIEMLADAISRAR
TTDAAAVARALEGMKYDNGFQRATMEAADHQLIQPLYVMEMDKAGTTGVRFDNEGSGYGF
RTVLALSPEKTRLPSVCRMKRP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgggcagatggattagccgcgtcgccgcggtcgccgtcctgggcgcgtgggccatcgcg
gccgccgctgcgggcggggagggcggcgccggaacgggagcggcggagccggtgaggctg
gcgctcgtcgagggcatgtcggggccgttcgccgatgcgggcgcggccgtcgagcgcaat
ctgcgtttcggcgtcgagcgcgtgaatgcgcgcggcggcgtcacgctcgccgacgggcgg
catccgctcgaactcgtcgtgatggacagccgcggcggcgtggaggaggcgctcgtgcag
cagcgggccgcggctgaccgccgcatcccgttcatcctgcagggcaatggctcggcggtc
gcggccgcgctcgtcgcggccatcgacaagcacaacgcccgcgagcccggcaatcgcgag
ctttttctcaattattcggccgacgacccggcgctcacaggtgccggctgcagcttctgg
catttccgcttcgacgcccacgcgggcatgcgcatgaacgcgctggccgacgtgatcgct
ggcgagcgggccgtgaagaaggtctatctgctgaatcaggattacagcttcgggcacgac
gtgagtgcgcttgcccgtgagtcgctggccgcgcgccggcctgacattgccgtggtgggc
gacgaatttcatccgatcggtcgcgtgaaggatttcaccccttatctcgcgaaaatccgc
gcgagcggggccgacgccgtcgtgaccggcaactggggcaacgatctgactctgctcgtg
aaagcggcgcgcgagcagggttacgtcgggaagttctacacgttctacggcaacagcctc
ggggcgccggccgcgctcggcgacgctggcgtcaagcgcgtggtggcggtggccgactgg
catccgaacgccggtgcgtcggcgcttttcgccgatcgggcctcgggcgcgaaaccggcg
ctctcggatgcctactacgcggcgttccgcgcgcgttttccggctgcccgcgacgattac
cccgtgctgcgcatggaaatcatgatcgagatgctggccgacgcgatttcacgcgcacgc
acgaccgacgccgcggcggtggccagggcgctcgagggtatgaagtacgacaacgggttt
cagcgcgcgacgatggaggcggccgatcaccaattgatccagcccctttatgtgatggag
atggacaaggcggggaccacgggcgtgcggttcgacaacgaggggtcggggtatggcttc
cgaaccgtgcttgcactatcgccggagaaaacccgcctgccgagcgtgtgccgaatgaaa
cggccgtga
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