Trinickia caryophylli: U0034_15750
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Entry
U0034_15750 CDS
T09722
Name
(GenBank) MATE family efflux transporter
KO
K26939
MATE family, multidrug efflux pump
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_15750
Transporters [BR:
tcar02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
U0034_15750
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Gene cluster
GFIT
Motif
Pfam:
MatE
DUF6095
Motif
Other DBs
NCBI-ProteinID:
WQE11199
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All DBs
Position
1:complement(3479763..3481142)
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AA seq
459 aa
AA seq
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MSQSGLSHAAAAPPKLSTHAAETARLAAPLAIAQLSQMAMGVTDTILLGALGAGAIAAGG
LGSNIFFFAVTLLQGVLSSVSVTVANARGSKAEHRVPPIYWSGLVLSVLLTVPAFAVLSF
TEPILLLFGEPAALARDVGAYTAVLRWASLGSLIGVGMMRAFLPAIGAAKRLLWISVASV
GVNAVLNYGLIHGAYGLPRLGLLGSATATTVTIWLTAIALVALLHGRPRYRHFVAAARPN
VPLMSELFGIGWPVAITFGVESALFLATGLMAGLFGETHLAANQIALNVTSVLFMVPLAI
GQAANVRVGYWIGAGHPLAARHAGFVALGLGIAFMSLSGLLLIIAPHAIVGLYLNLHDPV
NAQTVAIATALLGIAAVYQIVDGMQVIGAGCLRGLKDTRIPMVAAAFGYWGVGFPTGYLL
AFHADLGARGLWWGLAAGLSSVALLLTLRFERMTRPHRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatccggtctctcgcatgcggcggccgcgccgccgaagctttccactcacgca
gccgaaacagcccggctcgccgcgccgctcgctatcgcccaactctcgcaaatggccatg
ggcgtgaccgatacgatcctgctcggcgcactcggagcaggcgcgatcgcagccggcggc
ctcggatcgaatatcttttttttcgccgtcacgctgttgcaaggcgtgctgagttccgtc
agcgtgaccgtggccaatgcgcgcggctccaaggccgagcatcgcgtgccgccgatctat
tggagcggcctggtgctgtcggtgctgctcaccgtgcccgcattcgccgtactttcattc
acggagccgatcctgctcctgttcggcgaacccgcggcgctcgcgcgcgatgtcggcgcc
tacacggccgtgctgcgctgggcatcgctcggcagtctcatcggcgtcggcatgatgcgc
gcattcctgccggcgatcggcgcagccaagcgcctcttgtggatttcggtcgcgagcgtt
ggcgtcaacgcagtgctcaattatggtctcattcacggcgcttacggcctgccccggctt
ggcctgctcggctcggccactgccaccacggtgacgatctggctgacggcaatcgccctc
gtcgcgctgctgcatggccgcccgcgctatcgccatttcgtcgcggcggcccggcccaac
gtcccgctgatgagcgagctcttcggcatcggctggcctgtggccatcacgttcggcgtc
gagtccgcgctctttctggctaccggtctcatggcaggcctcttcggcgaaacacatctg
gccgcgaaccagatcgcactgaacgtcacgtccgtcctcttcatggtgccgctcgcgatc
gggcaagctgccaatgtgcgggtcggttattggatcggagccggacatccgctcgcggcg
cgccatgccggcttcgtcgcgctcggcctcggcatcgcgttcatgtcgctctcggggctg
ctgctcatcatcgcgccgcatgccatcgtcgggctgtatctgaacctccatgacccggtc
aatgcacagaccgtcgcgatcgccaccgcgctgctcggcatcgccgcggtttatcagatc
gtcgacggcatgcaggtgatcggcgccggttgcctgcgcgggctcaaagacacacgcatc
ccgatggtggctgccgcgttcggctactggggtgtcggatttcccacgggctacctgctc
gcgttccacgcggatctgggcgcgcgaggactctggtgggggcttgccgccggactgtcg
agtgttgcgctcctgctgacactgcgcttcgagcgcatgacccggccacaccgcaagtga
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