Trinickia caryophylli: U0034_16045
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Entry
U0034_16045 CDS
T09722
Name
(GenBank) NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
tcar
Trinickia caryophylli
Pathway
tcar00630
Glyoxylate and dicarboxylate metabolism
tcar00680
Methane metabolism
tcar01100
Metabolic pathways
tcar01120
Microbial metabolism in diverse environments
tcar01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U0034_16045
09102 Energy metabolism
00680 Methane metabolism
U0034_16045
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GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
WQE11251
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All DBs
Position
1:complement(3542695..3544284)
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AA seq
529 aa
AA seq
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MNTSATTPERAVRVFVPRDSSALALGADAVAEAIVREAAALGAAIELVRNGSRGLLWLEP
LVEIETAAGRVGYGNVEAADVPSLFEAGWLAGGTHARSVGVVDDIPYLKRQQRLTFARLG
ITDPLSIDDYVAHEGLAGLKAALAMDGDAAVEALVESGLRGRGGAAFPAGIKWRTVRAAK
AAQKYVVCNADEGDSGTFSDRLAMEGDPFCLIEGMIIAGIVTGATKGYIYVRSEYPHSIA
MLDAAIVKARAAGWLGASVLGSAHAFELEVAKGAGAYVCGEETALLESLEGKRGIVRAKP
PLPALAGLFGQPTVINNVITLATVPIIFARGAAFYRDFGMGRSRGTLPFQLAGNIKQGGL
VELAFGVTLRALIDEFGGGTASGRPARAVQVGGPLGTYLPESQWDIPLDYEAYAAVGAVV
GHGGIVVHDDTSDLADLAQYAMHFCALESCGKCTPCRIGSTRGVEVIQRIRNGDRSEKQV
QLLRDLCDTMVSGSLCAMGGMTPYPVLSALNHFPEDFGLHPVQPNAAAA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtccgcgacgactcccgagcgcgcggtgcgcgtattcgtgccgcgcgactcc
tccgcgctggcgctcggcgctgacgccgtagccgaggcgatcgtgcgcgaggccgccgcg
ctcggcgccgccatcgagctcgtgcgtaacggctcgcgcgggctcctgtggctcgagccg
ctcgtcgaaatagaaacggccgccggccgcgtcggctacggcaacgtggaggcggctgac
gttccttcgcttttcgaagccggctggctcgccggcggcacgcacgctcgctcggtgggc
gtcgtggacgacattccctatctcaagcgccagcagcggctcacgttcgcacggctcggc
atcaccgacccgctttccatcgacgattacgtggcgcacgaaggcctggcgggcctgaaa
gcggcgctcgcgatggatggcgacgcggccgtcgaggcgctcgtcgaatcggggttgcgc
ggccgcggcggcgcggcgttcccggccggaatcaaatggcgcactgtacgcgcggcgaaa
gcagcgcaaaagtacgtagtctgcaatgcggacgaaggcgactcgggcacgttctcggat
cgtctcgccatggaaggcgacccgttctgcctgatcgaagggatgatcatcgcgggcatc
gtgacgggcgcgacgaagggttatatctacgtgcgcagcgagtacccgcactcgatcgcc
atgctcgacgccgcgatcgtgaaagcgcgcgcggccggctggctcggcgcgagcgtgctc
ggctccgcgcacgcgttcgagctcgaggtggccaagggcgcgggcgcttatgtctgcggc
gaagaaacggcactgctcgaatcgctcgaaggcaagcgcggcatcgtgcgcgcgaagccg
ccgctgccagcgctggcaggtcttttcggccagccgaccgtcatcaacaacgtcatcacg
ctcgccaccgtgccgatcatcttcgcgcgcggcgccgcgttctatcgggacttcggcatg
ggccgctcgcgcggcacgctgccgttccagctggcgggcaacatcaagcagggcggactc
gtcgaattggcgttcggcgtgacgctgcgcgcgctcatcgacgaattcggcggcggcacg
gcgagcggccgtcccgcgcgtgcggtgcaggtcggcggcccgctcggcacttacctgccg
gaaagtcagtgggacatcccgctggactacgaagcgtatgcggcggtaggcgccgtcgtc
ggccacggcggcatcgtcgtgcacgacgacacgtcggatctcgccgacctcgcgcaatac
gccatgcacttttgcgcgctcgaatcgtgcggcaagtgcacaccgtgccgcatcggctcc
acgcgaggcgtggaagtgatccagcgcatccgcaacggcgaccggtcggaaaagcaggta
caactgctgcgcgatctgtgcgacacgatggtctcgggttcgctctgcgcgatgggcggc
atgacgccctaccccgtgctctccgcgctcaaccatttccccgaagacttcggtcttcat
cctgtccagccgaacgcggctgcggcttga
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