Trinickia caryophylli: U0034_16140
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Entry
U0034_16140 CDS
T09722
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_16140
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_16140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF3761
Motif
Other DBs
NCBI-ProteinID:
WQE11269
LinkDB
All DBs
Position
1:complement(3563693..3564364)
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AA seq
223 aa
AA seq
DB search
MNKLSKLAFIAATAVMAASASAQSVPASRQATNDNWVNGTGEYVWMNGTNELCWRDAFWT
PATANAKCDGALVAQAPTPPAPAAPVAPAITSQKVTYQADTLFDFDKAVLKPAGKQQLDD
LATKVQGMNTEVVVATGYTDKIGSDKYNDRLSLRRAQAVKAYLVSKGVPANKIYTEGKGK
RNPVKTDCNQKNRKALIACLAPNRRVEVEVVGTQQGPAPASQQ
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactttcaaagctcgcgttcattgcagctaccgcagtaatggctgcatccgct
tcggcacagtccgtgccggcgtcgcgacaagccacgaatgacaattgggtcaacggcacc
ggcgaatacgtgtggatgaacggcacgaacgagctttgctggcgcgatgcgttctggacg
ccggcaacggcgaacgcgaagtgcgacggcgcgctggttgcccaggcaccgacgccgccg
gctcccgccgccccggtcgctccggcgatcaccagccagaaggtcacgtaccaggccgat
accctgttcgacttcgacaaggctgtgttgaagccggctggcaagcaacagctcgacgat
ctggccacgaaggtccaaggcatgaacacggaagtggtcgtcgccacgggctacacggac
aagatcggttcggacaagtacaacgaccgtctgtcgctgcgccgtgcgcaagccgtcaag
gcctacctggtcagcaagggcgttcccgccaacaagatctacacggaaggcaagggcaag
cgcaacccggtcaagaccgattgcaaccagaagaaccgcaaggcgctcatcgcctgcctc
gcaccgaaccgtcgcgtggaagtggaagtggtcggtacgcagcaaggcccggctccggcc
agccagcagtaa
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