Trinickia caryophylli: U0034_16145
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Entry
U0034_16145 CDS
T09722
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcar03032
]
U0034_16145 (gyrA)
03400 DNA repair and recombination proteins [BR:
tcar03400
]
U0034_16145 (gyrA)
Enzymes [BR:
tcar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
U0034_16145 (gyrA)
DNA replication proteins [BR:
tcar03032
]
Prokaryotic type
DNA Topoisomerases
U0034_16145 (gyrA)
DNA repair and recombination proteins [BR:
tcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U0034_16145 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WQE11270
LinkDB
All DBs
Position
1:3564894..3567512
Genome browser
AA seq
872 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYIEYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRMAKIGHELLADIDKETVDFGPNYDGSENEPLILPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDACHHLLKNPQASVDELAEIVPAPDFPTGGIIYGVTGVREGYRTGRGRV
VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKATQLQDTFGINMVALVDGQPKLLNLREMLESFLAHRRE
VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLV
RDMLTRAESDNAAAGGREAYRPEGLNPAFGMQPDGLYRLSDTQAQEILQMRLQRLTGLEQ
DKIIGEYREVMAQIADLLDILARPERITAIIGDELTAIKAEFGDARRSKIEPNATELNTE
DLITPQEMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHDHIL
CFSNRGRVYWVKVYEVPQGSRNARGRPIVNMFPLQDGEKINVVLPVKEFSADKFVFMTTA
LGTVKKTPLEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDAGKAVRFDENDV
RPMGREARGVRGMQLEEGQQVIAMLVAGSEEQSVLTATENGFGKRTPITEYTRHGRGTKG
MIAIQTSERNGKVVAATLVDAEDQIMLITTTGVLIRTRVAEIREMGRATQGVTLISLDEG
TKLSGLQKIAEADGEVDLDIAAEDGSGADDES
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagactctgcccatctccctcgaggaggaaatgcgccgctcg
tatatcgagtacgcgatgagcgtgatcgtggggcgtgcgctgcccgatgtccgcgacggc
ctgaaaccggtgcaccggcgtgttctgtacgccatgcacgagctcaacaacgactggaat
cgcgcctacaagaagtccgcgcgtatcgtcggcgacgtcatcggtaagtaccatccccat
ggcgattcggccgtatacgacacgatcgtgcgcatggcgcaggacttttcgctgcgctac
atgctggtggacgggcagggcaacttcggttccgtcgatggcgacaacgccgcggccatg
cgttacaccgaaatccgcatggcgaagatcggccacgaactgctcgccgacatcgacaag
gaaaccgtcgatttcggcccgaactacgacggcagcgagaacgagccgctgatcctgccc
gcgcgcatccccaatctgctgatcaatggttcgtcggggatcgcggtgggcatggcgacg
aacattccgccgcacaacctgaacgaggtggtcgatgcgtgccaccacctgctcaagaat
ccgcaggcgagcgtggacgaactggccgagatcgtgccggcgcccgattttccgacgggc
ggcatcatctacggcgtgaccggcgtacgcgagggctatcgcaccgggcgcggccgcgtg
gtgatgcgcgcggccacgcacttcgaggaaatcgatcgcgggcagcgcatggcgatcatc
gtcgacgaactgccctatcaggtgaacaagcgctcgctgctcgagcgtattgccgagctc
gtcaacgagaagaagctcgagggcatctccgacatccgcgacgagtccgacaagagcggc
atgcgcgtcgtgatcgagctcaagcgcggcgaggtgcccgaggtcgttctcaacaacctg
tacaaggccacccagcttcaggatacgttcggcatcaacatggtcgcgctcgtggacggc
cagccgaagctgctgaatctgcgggaaatgctcgagtcgttcctcgcgcatcggcgcgaa
gtgctgacgcggcgcaccgtctacgaactcaggaaggcgcgcgagcgcggccacgtgctc
gaaggcctcgccgtcgcgcttgcgaacatcgacgaattcatcgcgatcatcaaggcggct
ccgacgccaccgatcgccaagcaggagctgatggcccgcccctgggattcgtcgctcgtg
cgcgacatgctcacgcgcgcggaaagcgacaacgccgcagccggtgggcgcgaggcgtac
cgccccgaagggctcaatccggcgttcggcatgcagccggacggcctttacaggctttcc
gacacgcaggcgcaggaaattttgcagatgcgcctgcagcgcctcacgggactcgagcag
gacaagatcatcggcgagtatcgcgaagtgatggctcagatcgccgatctgctcgacatc
ctcgcgcggcccgagcggatcacggcgatcatcggcgacgaactcaccgcgatcaaggcc
gagttcggcgatgcgcgccgctcgaagatcgaaccgaacgcgaccgagctcaataccgag
gatctgatcacgccgcaggaaatggtggtcacgatgtcgcacgcgggctacgtgaagtcg
cagccgctttccgaatatcgcgcgcaaaagcgcggcgggcgcggcaagcaggccacgcag
atgaaggaagacgattggatcgacacgctgttcatcgcgaacacgcacgatcacattctt
tgcttctcgaaccgcgggcgcgtctattgggtcaaggtctacgaggtgccgcaaggctcg
cgcaacgcgcgcggccggcccatcgtaaacatgttcccgctgcaagatggcgagaagatc
aacgtcgtgctgccggtgaaggagttttcggcagacaagttcgtttttatgacaacggcg
ctcggcaccgtcaagaaaacgccgctcgaggctttcagcagaccattgcgcaaaggtatc
attgcggttggcctcgacgatggcgattatctgatcggcgccgcgatcaccgacggtcag
cacgacgtcatgctgttctcggatgcgggtaaagccgtgcgcttcgacgagaacgacgtg
cgcccgatgggccgcgaagcgcgtggcgtgcgcggcatgcagctcgaggaagggcagcag
gtcatcgccatgctggtggcgggcagcgaagagcaatcggtgctgacggcaaccgagaac
ggtttcggcaaacgcacgccgatcacggagtacacgcgccacggccgcggcacgaagggc
atgatcgcgatccagacctcggagcgaaacggcaaggtggtcgccgccacgctcgtcgat
gcggaagatcagatcatgctgatcacgacgacgggtgtgctgattcgcacgcgtgtagcc
gagatccgtgaaatgggccgcgcgacgcagggtgttacactcatcagcctcgacgaaggt
accaagctttccggcctgcagaagattgcggaggcggacggcgaggtcgatttggatatc
gcggccgaggatggaagcggcgcggacgacgaaagctga
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