Trinickia caryophylli: U0034_16185
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Entry
U0034_16185 CDS
T09722
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
tcar
Trinickia caryophylli
Pathway
tcar03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
U0034_16185 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tcar03011
]
U0034_16185 (rpsA)
Ribosome [BR:
tcar03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
U0034_16185 (rpsA)
Bacteria
U0034_16185 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
WQE11278
LinkDB
All DBs
Position
1:3575064..3576821
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AA seq
585 aa
AA seq
DB search
MSRSSARSHAFTIFMSDLQTSNPNTESFAALFEESLTKQDMRAGEVISAEVVRVDHNFVV
VNAGLKSEAYIPIEEFLNDQGEVEVQAGDFVSVAIDALENGYGDTILSRDKAKRLASWLS
LEKALDNNELVTGTITGKVKGGMTVMVNGIRAFLPGSLVDTRPVKDTTPYEGKTLEFRVI
KLDRKRNNVVLSRRAVIEATQGEERAKLLETLKEGAIVNGVVKNITDYGAFVDLGGIDGL
LHITDIAWRRVRHPSEVLSVGQEVTAKILKFDQEKNRVSLGIKQLGDDPWEGISRRYPSG
TRLFGKVTNITDYGAFVEVESGIEGLVHVSEMDWTNKNVAPSKVVQLGDEVEVMVLEIDE
DRRRISLGMKQCKPNPWDDFSRNFKKGDKITGAIKSITDFGVFIGLPGGIDGLVHLSDLS
WSESGEEAVRKYKKGDEVEAVVLGIDVEKERISLGIKQLEGDPFSNYVAMNDKGSVVDGT
VKSVDAKGAVIALTADVEGYLRASEIAQDRVEDARNVLKEGDKVNAMVINIDRKSRSINL
SIKAKDSAEQQEAMRGLAADTSAAASGTTNLGALLKAKLDGQQNQ
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtcgtcagcgcgaagccatgcatttacgatttttatgtccgacctgcaaacc
tccaacccgaataccgaatcctttgcggctctgttcgaagagtcgctgaccaagcaagac
atgcgcgccggcgaggtcatctccgccgaagtcgtgcgtgtcgaccacaacttcgtggtc
gtcaacgcgggtctcaagtccgaagcctacattcccatcgaggaattcctgaacgatcag
ggcgaggttgaagtgcaggcgggcgacttcgtttcggtcgcgatcgacgcgctcgaaaac
ggctatggcgacacgatcctgtcgcgcgacaaggcgaagcgtctggcttcgtggctctcg
ctcgagaaggcgctcgacaacaacgaactcgtgacgggcacgatcacgggcaaggtcaag
ggcggcatgaccgtcatggtcaacggcatccgcgcgttcctcccgggctcgctcgtcgac
acgcgtcccgtcaaggatacgacgccgtacgaaggcaagacgctcgagttccgcgtcatc
aagctcgaccgcaagcgcaacaacgtggtgctgtcgcgccgcgcggtgatcgaagcgacg
cagggcgaagagcgcgcgaagctgctcgagacgctcaaggaaggcgcgatcgtcaacggc
gtggtcaagaacatcaccgattacggtgcgttcgtggatctcggcggcatcgacggcctg
ctgcacatcaccgacatcgcatggcgccgcgtgcgtcacccgagcgaagtgttgtcggtc
ggccaggaagttacggccaagatcctcaagttcgaccaggaaaagaaccgcgtctcgctc
ggcatcaagcaactgggcgacgatccgtgggaaggcatttcgcgccgctacccgtcgggc
acgcgtctgttcggcaaggtcacgaacatcaccgactacggcgcgttcgtcgaagtggag
tcgggcatcgaaggcctcgtccacgtgtcggaaatggactggacgaacaagaacgttgca
ccgtcgaaggtcgttcagctcggcgacgaagtggaagtcatggtgctcgagatcgacgaa
gatcgtcgtcgtatcagcctcggcatgaagcagtgcaagccgaatccgtgggatgacttc
agccgcaacttcaagaagggcgacaagatcacgggcgcgatcaagtcgatcaccgacttc
ggcgtgttcatcggcttgcctggtggcatcgatggcctcgttcacctctcggacctctcg
tggagcgagtcgggcgaggaagccgttcgcaagtacaagaagggcgacgaagtggaagcg
gtcgtgctcggcatcgacgtcgagaaagagcgcatttcgctcggcatcaagcagctcgaa
ggcgatccgttcagcaactacgttgcaatgaacgacaagggctcggttgtcgacggcacg
gtgaagtcggtcgatgccaagggcgcggtcatcgcgcttacggctgacgtcgaaggctac
ctgcgtgcgtcggaaatcgcgcaagaccgcgtcgaagatgcccgcaacgtgctgaaggaa
ggcgacaaggtcaacgcgatggtgatcaacatcgatcgcaagtcgcgcagcatcaacctg
tcgatcaaggcaaaggattcggccgaacagcaagaagcgatgcgcggtcttgcagccgat
acgagcgccgcggcgtcgggtacgacgaaccttggcgcgctgctgaaggccaagctcgac
ggccagcagaaccagtaa
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integrated database retrieval system