Trinickia caryophylli: U0034_16280
Help
Entry
U0034_16280 CDS
T09722
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_16280
03036 Chromosome and associated proteins [BR:
tcar03036
]
U0034_16280
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
U0034_16280
Chromosome and associated proteins [BR:
tcar03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
U0034_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
MarR
DDRGK
HTH_Crp_2
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WQE11295
LinkDB
All DBs
Position
1:3595687..3596175
Genome browser
AA seq
162 aa
AA seq
DB search
MRTQRQPVRRLDKIDHHILKVLQDDGRIAMKDLAERVGLTVTPCIERVKRMERDGVITGY
YARVDPTQLGASLLVFVEITLDHKSGNMFEKFRREVQKIPEVLECHLVSGDFDYLIKARI
GEMADYRKLLGDILLQLPGAVQSKSYVVMEEIKETLAIPLSD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcagcgccagccggtacgccggctcgacaaaatcgatcaccacattctcaag
gtgctccaggacgacggccgcatcgccatgaaagatctggccgagcgggtcggcttgacg
gtgacgccctgcatcgaacgcgtgaagcgcatggagcgcgacggcgtgatcacgggctat
tacgcgcgcgtcgatccgacgcagctcggcgcctcgctgctcgtgttcgtcgaaatcacg
ctggaccacaagagcgggaacatgttcgaaaagtttcggcgcgaggtgcagaagatcccc
gaggtgctggaatgccatctcgtctcgggcgatttcgactatctgatcaaggcccgcatc
ggcgaaatggccgactatcgcaagttgctcggcgacatcctgctgcagttgcccggcgcc
gttcagtcgaagagctatgtcgtcatggaagagatcaaggaaacgctcgcgatccccttg
agcgattga
DBGET
integrated database retrieval system
