Trinickia caryophylli: U0034_16300
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Entry
U0034_16300 CDS
T09722
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00071
Fatty acid degradation
tcar00362
Benzoate degradation
tcar00650
Butanoate metabolism
tcar01100
Metabolic pathways
tcar01120
Microbial metabolism in diverse environments
tcar01200
Carbon metabolism
tcar01212
Fatty acid metabolism
Module
tcar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
U0034_16300
09103 Lipid metabolism
00071 Fatty acid degradation
U0034_16300
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
U0034_16300
Enzymes [BR:
tcar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
U0034_16300
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
F420_oxidored
NAD_binding_2
NAD_binding_7
Pyr_redox_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WQE11299
LinkDB
All DBs
Position
1:complement(3599864..3601990)
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AA seq
708 aa
AA seq
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MNGSQAAPFVTHALDANVLVIRIDHPPVNALSADVRRSLVAAIEEAEANPAVAVALIIGT
GRNFIAGADIREFGKPPQPPLLPTVCERIESSTKPVVAAIHGAALGGGLEIALAAHYRIA
LRDAKLGLPEVNLGLLPGAGGTQRAPRLIGAPAALDLMLSGRHVSGNEALALGLVDRLAA
SGDIAAEGLAYARELASAQAAPRPTRDAQALARDPTAAKAAIDAARAQIAARSRGLLSPM
KIVDAVQAALERPFDEGLALERSAFLECLASPQRAGLVHAFFAEREAAKAPETQASSPRS
IERVGIVGGGTMGAGIAVAVLDAGLPIVMIEREEAALAAGRARVERVYEGLVAKGRIQAA
DKAAALARFTGSTSYEALSDADLVIEAVFEDMSVKKAVFVELDRVARSGAVLATNTSYLD
IDEIASATGRPADVIGLHFFSPANVMKLLEIVVPARVAPDVVATAFDFARRLRKVAVRAG
VCDGFIGNRLLAVYRTAADYLLEDGASPYQIDGAMRAFGYPMGPYQVVDLAGGDIGWAAR
KRRAATRDPRARYVEIADRLCERGWFGQKTGRGFYRYEDGARVGKPDPEVEAIVAAERER
HGIVPRTFSDEEIVRRLMMAVINEAANVVREGIALRPLDVDVTLVHGYGFPRYRGGPMKY
ADTLGLANVLAALRRYEREDALFWKPSTLIIELVERGADFSSLDEPRS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatctcaagccgcccccttcgtcacgcacgcgctcgatgcgaacgtgctcgtc
atcaggatcgatcaccctcccgtgaacgcactgagtgccgacgtgcgccgctcgctcgtc
gcggccatcgaggaagccgaggccaacccagccgtcgctgtcgcactgatcatcggcacc
ggccgcaacttcatcgcgggcgccgatatccgcgagttcggcaagccccctcagccgccc
ctgctgcccacggtctgcgagcgcatcgagtcgtcgacgaaaccggtggtcgccgcgatc
cacggggcagcgctcggcggcgggctcgagatcgccctggccgcgcactatcgcatcgcg
ctgcgcgatgcgaagctcggattgcccgaggtgaatctcggcttgctgccgggtgcaggg
ggcacgcagcgcgcgccccgcctcatcggtgcgcccgcggcgctcgacctcatgctttcg
ggccgtcacgtaagcggtaacgaggcgcttgcgctcgggctcgtcgaccgcctcgccgca
agcggcgacatcgcagccgaaggtctcgcctatgcgcgcgaactcgcctccgcccaggcg
gccccccgtccgacgcgcgacgcgcaagcgctcgcgcgagacccgaccgccgcaaaggcg
gcaatcgatgccgcacgcgcgcagatcgccgcgcgctcgcgcggcctgctctcgccgatg
aagatcgtcgacgcggtgcaagccgcgctcgagcggccattcgacgaaggtcttgcgctg
gagcgcagcgcctttctcgaatgcctcgcgagcccgcagcgcgcggggctcgtccatgcg
ttcttcgccgagcgcgaagctgccaaggcgcccgaaacgcaagcgtcgtctcctcgctcg
atcgaacgcgtcggcatcgtgggcggcggcaccatgggtgccggcattgccgtggccgta
ctcgatgccggcttgcccatcgtcatgatcgagcgcgaggaggccgcgctcgccgcaggg
cgcgcgcgcgtcgagcgcgtctacgaagggctcgtcgcgaagggccgcattcaggccgcc
gataaggctgcggcgctggcgcgcttcaccggcagcacatcttacgaggcgctctcggat
gccgatctcgtcatcgaagccgtgttcgaggacatgtccgtaaaaaaagccgtcttcgtc
gaactcgatcgcgtggcgcggtccggcgccgtgctggccaccaatacgtcgtacctcgac
atcgacgaaattgcgtcggccaccgggcggcccgccgacgtgatcggcctgcacttcttc
tcgcccgccaacgtgatgaagctgctggagatcgtcgtgcccgcgcgcgtcgcacccgac
gtggtcgccaccgcattcgatttcgcacggcgcctgcgcaaggtggccgtgcgcgcgggc
gtatgcgacggtttcatcggcaaccgtctgctcgccgtttatcggacggcggccgactat
ctgctggaagacggcgcctcgccgtaccagatcgatggcgccatgcgcgcgttcggttac
cccatgggcccttatcaagttgtcgacctggcaggcggcgacatcggctgggcggcgcgc
aagcgccgcgcagccacgcgcgatccgcgcgcccgctacgtcgaaatcgccgaccggctc
tgcgagcgcggctggttcgggcagaagacgggccgcgggttctaccgctatgaggacggg
gcgcgcgtgggcaagccggacccggaagtcgaagccatcgtcgcggcggagcgcgagcgg
cacggcatcgtcccgcgcaccttcagtgacgaggagatcgtgcggcgcctcatgatggcc
gtcatcaacgaggcagcgaacgtcgtgcgggaggggatcgcgctgcgtccgctcgatgtc
gacgtgacgctcgtgcatggctacggttttccgcgctatcgcggcggcccgatgaaatac
gccgatacgctcggcctcgccaacgtgctcgcggctctgcgccgctacgaacgcgaagac
gcactgttctggaaaccgtccacgctgatcatcgaactcgtcgagcgcggcgcggacttc
tcgagcctcgacgagccgcgctcctga
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