Trinickia caryophylli: U0034_16505
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Entry
U0034_16505 CDS
T09722
Name
(GenBank) GlxA family transcriptional regulator
KO
K21825
AraC family transcriptional regulator, L-arginine-responsive activator
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_16505
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
AraC family
U0034_16505
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_23
HTH_11
HTH_Crp_2
FaeA
TetR_N
HTH_17
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WQE11334
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Position
1:3645370..3646440
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AA seq
356 aa
AA seq
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MTVRPPSGVPRVTEVAVVALPPVSLSGLAPIVDTLSLANEIDGRQRFRMRICSWDGRPVS
LSGGAVLPADCAFGDGLACDWLIVLTERFQQFADYRLFLASLARVGQRTPLVSGIHHGVW
WLAMAGQLSGYRVSVNWETYQQFAEQFERSIVTQQIFEIDRDRATCAGGQASADFMLAMI
AREHGAELAERIADTLGLGALRQAEERQRIPYVTAPGERHPRLNDALKLMEANVEDPLTT
DEIAEAVGVSRRQLERLFRQYLGAMPSKYYLGLRLVKARLQLQRTSKSIVQVSLACGFAS
AAHFSNAYRERFGVTPREERRNWIARQGSGAPFAAEPRAGALIEPPEAGATRTEPR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcgcccgccctcgggcgtgccgcgtgtgaccgaggtcgccgtcgttgcgctg
ccgcccgtttcgctctcgggcctcgcgcctatcgtcgataccctttcgctcgccaacgag
atcgacgggcggcagcggtttcgcatgcgcatctgctcgtgggacgggcggcccgtttcg
ctctcgggcggcgcggtcctgccagccgattgcgcgttcggcgacgggctcgcctgcgac
tggctcatcgtcctgaccgagcgcttccagcagtttgccgactaccggctttttctcgcg
tcgctcgcgcgcgtcgggcagcgcacgccgctcgtcagcggaattcaccacggcgtctgg
tggctcgcgatggccggacagctttccggctaccgcgtgagcgtcaactgggagacctat
caacagttcgccgagcagttcgagcgctcgatcgtcacgcagcagatcttcgaaatcgac
cgcgatcgcgccacctgcgcgggcgggcaggcgagcgccgacttcatgctcgcgatgatc
gcgcgcgaacacggtgccgagttggccgagcgcatcgccgacaccctcgggctcggcgcg
ctgcgccaggcggaggagcgccagcgcattccttatgtgacggcgccgggcgagcggcat
ccgcggctcaatgacgcgctcaagctgatggaggcgaatgtcgaggatccgctcacgacg
gacgagatcgccgaggcagtcggcgtttcgcggcggcagctcgagcggctctttcgccag
tacctcggtgcgatgccgtccaaatattacctgggcctgcggctcgtcaaggcccggctg
caactgcagcgcacgagcaaatcgatcgtgcaggtgagtctcgcctgtgggttcgcgtcg
gcggcgcatttctcgaatgcctaccgggagcgctttggcgtcacgccgcgcgaggagcgc
cgcaactggatcgcgcggcagggctcgggtgcgccgtttgcggcggaacctcgtgccggc
gcgctgatcgagccccccgaggcgggcgcgacgcgcaccgaaccccgataa
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