Trinickia caryophylli: U0034_16650
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Entry
U0034_16650 CDS
T09722
Name
(GenBank) MdtB/MuxB family multidrug efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
tcar
Trinickia caryophylli
Pathway
tcar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0034_16650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_16650
Transporters [BR:
tcar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U0034_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Phage_coat
Motif
Other DBs
NCBI-ProteinID:
WQE11361
LinkDB
All DBs
Position
1:complement(3681366..3684497)
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AA seq
1043 aa
AA seq
DB search
MNPSRAFILRPVGTALLMAAILLVGLVALRFLPISALPEVDYPTIQVQTFYPGASPDVMT
SSVTAPLERQFGQMPSLNQMSSQSSAGSSIITLQFSLDLPLDVAEQEVQAAINAAGNLLP
SDLPAPPIYAKVNPADAPILTLAITSKTMPLTQLQNLADTRLAQKISQVAGVGLVSLAGG
NRPAVRIQANPLALAAYGLNLDDLRTTVANLNVNTPKGNFDGPTRNYAINANDQLTDASA
YQSAIVAYKSGRPVMLTDVAKIVDGAENTRLGAWIGTQQGVTPAILLNVQRQPGANVIQV
VDSIKAILPQLRASLPASLDVAVVTDRTTTIRASVRDVQFELAASVVLVVLVMYLFLANI
YATVIPSLSVPLSLIGTLAVMYLAGFSLDNLSLMALTIATGFVVDDAIVMIENIARYVEA
GDSPLEAALKGSRQIGFTIISLTVSLIAVLIPLLFMGDVVGRLFHEFAITLAVTIVISAV
VSLTLVPMMCAKLLRHTPPESRRFEAKAHALIDAVIARYGIALEWVLARQRSTLVVAVLT
LVLTGVLYVVIPKGFFPVQDTGVIQAITQAPQSISYGAMADRQSALAEVILRNPNVESLT
SFIGVDGTNITLNSGRMLINLKPASERSAGASSIIRDIAGEVADVPGISLFMQPVQDLTI
DSTVSPTQYQFMLTDPNADEFANWVPKLVERLKAAPELADVATDLQQSGRSVYVEIDRAS
AARFGITPATVDNALYDAFGQRIISTIFTQSNQYRVILEAEPQMQHYMDALKSIYLPSST
TTSGQVPLTSIAKFIERPAPLLVTHLGQFPATTISFNLAPGASLGQAVKAIRAAETAIGL
PASFQTRFQGAALAFQASLSNELFLILAAIVTMYIVLGVLYESFIHPITILSTLPSAGVG
ALLALMISGHDLDIIGIIGIVLLIGIVKKNAIMMIDFALEAEREEGKSPREAIYQACLLR
FRPILMTTMAALLGALPLMLGTGVGSELRHPLGIAIAGGLLVSQLLTLFTTPVIYLGFDS
LARRLRERFGMPPASRGPSDAGT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttcccgcgcgttcatcctgcgccccgtcggcacggcgctgctgatggcggcg
atcctgctcgtcgggctcgtcgcgctgcgctttttgccgatctccgcactgcccgaggtc
gactacccgacgatccaggtgcagacgttctaccccggtgcgagcccggacgtcatgact
tcgtcggtcacggcaccgctcgaacggcagttcggccagatgccgtcgctcaatcagatg
agctcgcaaagttcggccggctcgtcgatcatcacgctgcagttcagcctcgatctgccg
ctcgacgtagccgagcaggaagtccaggccgccatcaacgcggccggcaacctgctgccg
tcggatctgccggcgccgccgatctacgccaaggtcaacccggccgatgctccgatcctc
acgctcgcgatcacgtcgaagacgatgccgctcacgcaattgcagaatctcgccgacacg
cggctcgcgcagaagatctcgcaggtggcgggcgtcggcctcgtgagtctcgcgggcggt
aaccgccccgccgtgcggattcaggccaacccgctcgcgctcgcggcctacggcctcaat
ctcgacgatctccgcacgacggtcgcgaatctgaacgtgaatacgccgaagggcaacttc
gacgggccgacgcgcaactacgcgatcaacgccaacgaccagttgaccgatgcgagcgcg
taccagagtgcgatcgtcgcctacaagagcggccgcccggtcatgctgacggacgtggcg
aagatcgtcgacggcgccgagaacacccggctcggcgcctggatcggcacgcagcagggc
gtcacgcccgcgattctgctcaacgtgcagcgccagcctggcgcgaacgtgattcaagtt
gtcgacagcatcaaggcaatcctgccgcagttgcgcgcctcgttgccggcctcgctcgac
gtggccgtcgtcaccgatcgcacgaccacgatccgcgcctcggtgcgcgacgtgcagttc
gagctcgccgcctccgtcgtgctcgtggtgctcgtgatgtacctctttctcgccaatatc
tacgcaacggtcattccgagcctctcagtaccgctttcgctgatcggcacgctcgccgtc
atgtatctggcgggtttctcgctcgacaatctctcgctgatggcgctgaccattgccacg
ggcttcgtcgtcgacgacgcaatcgtcatgatcgagaacatcgcgcgctacgtcgaagcg
ggcgattcaccgctggaggcggcgctcaagggctcacggcagatcggcttcacgatcatc
tcgctcacggtctcgctcatcgcggtgctgattccgcttctattcatgggcgacgtggtg
ggacgcctgttccacgagttcgcgatcacgctcgccgtgacgatcgtcatctcggccgtc
gtctcgctcacgctcgtgccgatgatgtgcgcgaagctgctgcgccatacgccgcccgaa
agccgccgcttcgaggcgaaggcgcatgcgctcatcgacgccgtgatcgcgcgctacggc
atcgcgctcgaatgggtattggcgcgccagcgctcgaccctcgtcgtggccgtgctcacc
ctcgtgctgacgggggtgctctatgtcgtgatcccgaaagggttctttccggtgcaggat
accggtgtgatccaggccatcacccaagcgccgcaatcgatctcgtacggagcgatggcc
gatcgccaaagcgcgctcgccgaggtgatcctgcgcaacccgaacgtcgaaagcctcacg
tcgttcatcggcgtggacggcaccaacattacgctcaacagcgggcgcatgctgatcaat
ctcaagcccgcgagcgaacgcagcgccggtgcgagcagcatcattcgcgacatcgcgggc
gaggtggcggacgtaccgggcatttcgcttttcatgcagcccgtgcaggacctcacgatc
gactcgacggtcagcccgacgcagtatcagttcatgttgaccgaccccaacgccgacgag
ttcgcgaactgggtgccgaagctcgtcgagcggctcaaggctgcgcccgaactcgccgac
gtcgccaccgatctgcagcaaagcggacgctccgtctacgtcgaaatcgaccgcgcgagc
gccgcccgtttcggcatcacgcctgccaccgtcgacaacgcgctctacgacgccttcggg
cagcggatcatttcgacgatcttcactcagtcgaatcagtatcgcgtgatcctcgaggcg
gagccgcagatgcagcactacatggacgcgctcaagtcgatctacctgccttcgtccacc
acgacgagcggacaggtgccgctcacgtccatcgcgaaattcatcgagcgccccgccccg
ctgctcgtcacgcacctcggtcagtttccggccacgacgatctcgttcaacctcgcgccg
ggcgcctcgctcgggcaagccgtcaaggcgatccgcgcggccgaaaccgcgatcggcctg
ccggcctcgtttcagacgcgcttccagggcgcggcactcgcgttccaggcctcgctttcg
aacgaactgtttctgatcctggccgccatcgtcaccatgtacatcgtgctcggcgtgctc
tacgagagcttcatccatccgatcacgattctctcgaccctgccctcggccggcgtgggg
gcgctgctcgcactgatgatttcgggccatgacctcgacatcatcggcatcatcggcatc
gtgctgctgatcggcatcgtgaagaagaacgcgatcatgatgatcgacttcgcattggag
gccgagcgcgaggaaggaaaatcgccgcgcgaggccatctatcaggcttgcctgctgcgc
ttcaggccgattctcatgacgacgatggcggcgctcctcggcgcgctgccgctcatgctc
ggcaccggcgtgggctcggagctgcgccatccgctcggcatcgccattgcgggcggcctg
ctcgtgagccagttgctcacgctcttcacgacgcccgtcatctacctcggcttcgattcg
ctcgcgcgccggctgcgcgaacgcttcggcatgccgccggcgagccgcggcccgagcgac
gcaggcacgtga
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