Trinickia caryophylli: U0034_16715
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Entry
U0034_16715 CDS
T09722
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U0034_16715 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcar03400
]
U0034_16715 (recC)
Enzymes [BR:
tcar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U0034_16715 (recC)
DNA repair and recombination proteins [BR:
tcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U0034_16715 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WQE11374
LinkDB
All DBs
Position
1:3697931..3701353
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AA seq
1140 aa
AA seq
DB search
MLQVLYSNRYETLVEALCEDLSTMPADPWASEEVVVPSAAARRHIELELAKRRGICANVN
FGYLAQWLWARIGGVLEVPAHSPLAVERLQWRCYRLFSERGREEAGLAGAGGGYASPRLA
AYLDAADAPMRYELARRVATLFDHYLTYRPEWLARWQAGGSIFDEPQRAGVRPGSGPQLR
EDERWQAALWRAVLAELAGGDDALAAVAPPAHRFLDVARGLDLDAVMRARWPASVSVFAL
PTIAPLHIALLRELSHWMDVRLYVMNPCRQFWFDIVSVRAAVALDAAGSLDYHEVGHPLL
AEWGRQTQAQLHLVHELTEGAASAEATRFMENPAPGWLAKLQNAMLDLETEEPEPALGEQ
GGARASQTVEVHVCHSLSRQLEVLHDRLLGWFDDGAREDGAGGLRPSDVLVVCPDLAAAA
PLVDAVFGTMEIDDRRRIPYRVTGLPASQANPVARVLLQWLALGERGATAPELVEWLRID
AVAARYGIDAGALDAAQAWLAAAGARRGLAPSASGGEQAPLARHTFSDALTRLFLGYAMP
DGGEPVDAWLPVPGAQGAESELLGRLARFVDDLERFAGGLGEPRAGEAWARVLGDALEQF
FDEGPAFSDAVGAVRDALDSTLDTLRDGAGEMPVPVDVLRAALTAALDDSAKGGVPWGGV
TFSSLTSLRGLPYRAICLIGMDEGALPSLARPDEFDLMAACPLLGDRQRRADERNLFLDL
LLAARDRFFVAYTGRSIRDNAPLPPAALVDELLDHLARAAAGPGAAPSQVDAARRAFIVE
HPLQPFSSAYFEAQSGLFTYDAERAQLAERLTAGEPARARPFFAQPLPPEPDGPIAFADF
VRFWQHPARAQLRERLGIVLESADGELIDTEPFALDYAASDALAERILPRLVEDGGEAVR
ARAMRVADASPELPIGATGGVMKRRELAALQRLAADVRADAAGARARRLTFALAVRPAWP
DTGGAALFGVHDAALAQAVQAAPARELQGALGGLTDNGLVLYRYARAGARDYLGAWLAHL
VYCAAEPDGPRRTVWHGRDERFEFAPVAAPLDLLAPLLALFLAGRRAPLPFFPRSAWAKA
KSGDAEALGTWISDRVRGESEDPALAIAWRGLPLALDERFAAVSRFVFDPLIAHLSGEDA
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggttctctactccaaccgttacgagacgctcgtcgaagcactctgcgaagat
ctttcgacgatgccggcggatccgtgggcgagcgaagaggtcgtcgtgccgagcgccgcg
gcccgccggcatatcgaactcgaactcgcgaaacggcgggggatttgcgcgaacgtcaat
ttcggctatctggcgcagtggctctgggcccggatcggcggggtactcgaggtgcctgcg
cattcgccgctcgcggtggagcggctccaatggcgctgctaccggctcttctccgaacgc
gggcgcgaggaggcgggcttggccggggccggcggcgggtatgcgtcgccgcggctcgcc
gcctatctcgacgcggccgacgcgccgatgcgctacgagctcgcgcggcgcgtggcgacg
ctgttcgaccactatctgacctatcgcccggaatggctcgcccgctggcaagcgggcggt
tcgatcttcgacgaaccgcagcgcgcgggcgtgcgccccggcagcggcccccagctgcgc
gaggacgagcgctggcaggcggcgctctggcgcgcggtgctggccgagctcgccgggggc
gacgatgcgcttgccgccgttgccccgcccgcccatcggtttctcgacgtcgcacgcggg
ctcgatctcgacgccgtgatgcgcgcgcgctggccggcttcggtgagcgtgttcgcgcta
ccgacgatcgcaccgcttcacatcgcgctcttgcgcgagctgtcgcactggatggacgtg
cggctgtacgtcatgaacccgtgccgccagttctggttcgatatcgtcagcgtgagagcg
gccgtcgcgctcgacgcggccgggtcgctcgactaccacgaggtgggtcatccgctgctt
gcggagtgggggcgtcagacgcaggcgcaactgcacctggtgcatgaattgaccgaggga
gcagcctcggccgaggcgacgcggttcatggagaatcctgcgccgggctggctcgcgaag
ctgcaaaacgccatgctcgatctcgaaaccgaggaacccgagcccgcgcttggggagcaa
ggcggcgcacgcgcgagccagacggtggaagtgcacgtctgccacagcctgtcgcgccag
ctcgaagtgctgcacgaccggctgctgggctggttcgacgacggtgcgcgcgaagacgga
gcgggcgggctgcggccatcggacgtgctcgtcgtctgccccgacctggccgccgcggcg
ccgctcgtcgatgcggtcttcggcacgatggagatcgatgaccggcgccgcatcccttac
cgcgtgacgggcctgcccgcttcgcaggcgaatccggtcgcgcgcgtgctgctgcagtgg
ctcgcgctcggcgagcgcggggccacggctccggaactcgtcgaatggctgcgtatcgac
gcggtggccgcgcgttacggcatcgatgcgggcgcgctcgacgccgcgcaggcatggctc
gcggcggccggcgcgcggcgcgggctcgcgccctcggcctcgggcggcgagcaggcgccg
cttgcgcgccatacgttctccgatgcgctcacgcggctttttctcggttatgcgatgccc
gacggcggcgagcccgtggacgcctggctgcccgtgcccggggcgcaaggcgccgaaagc
gaactgctcgggcgccttgcgcgctttgtcgacgatctcgagcgcttcgcaggcgggctc
ggcgagccgcgcgcgggcgaggcatgggcacgcgtgctcggcgacgccctcgagcagttc
ttcgacgaagggccggcgttctcggatgcggttggagcggtgcgcgatgcgctcgactcg
acactcgacacgctgcgcgacggtgccggcgagatgccggtaccggtcgacgtgctgcgt
gcggcgctcacggcggcactcgacgacagcgcgaaggggggcgtgccttggggcggtgtg
acgttctcctcgctgacgagcctgcgcggcctgccctatcgtgcgatttgcctcatcggc
atggacgagggcgcattgcccagcctcgcgcgtcccgacgaattcgatctgatggcggcg
tgcccgctgctcggcgaccggcagcggcgcgccgacgaacgcaacctctttctggacctg
ctgctcgccgcgcgcgaccggttcttcgtcgcctatacgggacgcagcattcgcgacaac
gccccgctgccgccggccgcgctcgtcgacgaactgctcgatcacctcgcgcgtgcggcg
gcaggccccggcgctgcaccgtcgcaagtcgatgccgcacggcgggcgttcatcgtcgag
cacccgctccagccgttttcgagcgcttacttcgaggcgcaaagcggcctatttacttat
gacgccgagcgcgcgcagttggctgagcggctgacggcgggggagccggcgcgtgcgcgc
ccgttcttcgcccagccgctgccgccggaaccggacgggccgatcgcattcgccgatttc
gtgcgcttctggcagcacccggcgcgtgcgcagctgcgcgagcggctcgggatcgtgctc
gagtcggcagacggcgaactcatcgacaccgagccgttcgcgctcgactatgccgcgagc
gacgcactggccgagcggattttgccgcgcctcgtcgaagacggcggcgaagcggtacgc
gcgcgcgcgatgcgcgtggccgatgcgagccccgagctgccgatcggcgcaacgggcggc
gtcatgaagcgccgcgagctcgcagcgcttcagcggctggcggccgatgtgcgcgcagat
gccgccggcgcgcgggcgcggcgcctgacgttcgcgctggcggtgcgcccggcctggccg
gatacgggcggtgccgcgcttttcggcgtgcacgacgccgcgctcgcccaggcggtgcag
gccgcaccggcacgcgagctgcagggcgcgctcggcgggttgacggacaacgggctcgtg
ctctatcgatacgcacgtgccggcgcgcgcgactacctcggggcgtggctcgcccatctc
gtctattgcgcggccgagccggatggcccgcgccgtacggtctggcatgggcgcgacgaa
cggttcgagtttgcgcccgttgccgcgccgctcgatctgctcgcgccgctcctcgctctt
ttcctcgcggggcggcgcgcgccgctaccgttctttccgaggagtgcgtgggccaaggcg
aagagcggcgatgcggaagccctcggcacatggatcagcgatcgcgtgcgtggcgaatcg
gaggatcccgcgctcgcgattgcatggcgcggcttgccgctcgcgctcgacgagcgcttc
gccgcggtttcgcggttcgtattcgatcccctgatcgctcatctgagcggggaggacgca
tga
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