Trinickia caryophylli: U0034_17460
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Entry
U0034_17460 CDS
T09722
Name
(GenBank) ribulose bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00630
Glyoxylate and dicarboxylate metabolism
tcar00710
Carbon fixation by Calvin cycle
tcar01100
Metabolic pathways
tcar01110
Biosynthesis of secondary metabolites
tcar01120
Microbial metabolism in diverse environments
tcar01200
Carbon metabolism
Module
tcar_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U0034_17460
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
U0034_17460
Enzymes [BR:
tcar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
U0034_17460
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GFIT
Motif
Pfam:
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
WQE11516
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All DBs
Position
1:3857801..3858229
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AA seq
142 aa
AA seq
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MRITQGTFSFLPELTDEEIGLQIDYALQQGWACSVEFTDDPHPRNTYWEMWGLPMFDLRD
AAGILQEVRACRTTYPNHYIKVNAFDSARGFETMRLSFIVNRPAHEPGFKLTRTDDKGRM
QRYSMTSYASNAPAGERYGAKG
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcacgcaagggacgttttcttttctgccggagctgaccgacgaggaaatcggt
ctgcaaatcgactatgcgctgcagcagggctgggcctgttcggtcgaattcacggacgac
ccccatccgcgcaacacgtactgggaaatgtggggcctgccgatgttcgatttgcgcgac
gccgccggcattctgcaggaggtgcgtgcctgccgcacgacgtatcccaaccattacatc
aaggtcaacgcattcgattcggcgcgcggcttcgaaaccatgcggctctcgttcatcgtc
aaccgtcccgcgcacgagccgggattcaagcttacacgcacggacgacaagggccgcatg
cagcgctacagcatgacgagctacgcgagcaacgcgcccgcaggcgagcgttacggcgca
aagggttga
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