Trinickia caryophylli: U0034_17575
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Entry
U0034_17575 CDS
T09722
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_17575
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
LysR family
U0034_17575
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WQE11536
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Position
1:3882718..3883683
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AA seq
321 aa
AA seq
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MNFVRSLTLRQLQIFIVASRHASFARAAEELHLTQPAISMQIRQLEDAIGMPLFERVARK
LTLTEAGERLTHHASRILGEIKDAEDAMMSLQLADSGSIAVGIVSSATYFAPKLLALYSR
QYPKVDVHFSVGNRESLLRLLQDNAIDLALMGRPPAELDTTVEPLAYHPQVVIAPSDHPL
VGASRFDLQELRGDTFLLREPGSGTRMAAEEMFRQHLFTPAKIVTLGSNETIKQAVIAGM
GVSLISLHTLQLELRTSELAILDVNGTPIERTWQVVHMRTKQLSPTCTLFRRFLLEHTAP
YLEREYGGYVPHKLRPRVEEA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttcgtgcgctcgctgaccttgcggcagctgcagatctttatcgtggcgagccgg
catgcgagctttgcacgcgcggccgaagaactgcatttgacgcagcccgccatttcgatg
caaatccgtcagctcgaggatgcgatcggcatgccgctcttcgagcgcgtggcgcgcaag
ctcacgctgaccgaggcgggcgagcggctcacgcaccacgcaagccgcatcctcggcgaa
atcaaggatgccgaagatgcgatgatgtcgctgcaattggccgatagcggctccattgcc
gtcggcatcgtcagctcggccacttacttcgcgccgaagctgctcgcgctttattctcgg
cagtatcccaaggtcgacgtgcacttttcggtcggcaatcgcgagtcgctgctgcggctg
ctgcaggacaatgcgatcgacctggcgctgatgggacggccgccagccgagctcgatacg
accgtcgagccgctcgcctaccatccgcaggtcgtcatcgcgccgagcgatcatccgctc
gtgggcgcgagccgcttcgatctgcaggagctgcgcggcgacacgttcttgctgcgcgag
ccgggttcaggcacgcgcatggccgccgaggagatgttccggcagcatcttttcacgccc
gcgaaaatcgtgacgctcggcagcaacgaaacgatcaagcaggccgtgatcgcgggcatg
ggcgtgagcctcatttcactgcacacgctgcagctcgaactgcgcacgagcgagctcgcg
attctcgacgtcaacggtacgcccatcgagcgaacctggcaggtcgtgcacatgcgtacg
aagcagctttcccccacgtgcacgctctttcgacgcttcctgctcgagcacacagcgcct
tacctcgagcgggaatacggaggctacgtgccgcacaagctgcgcccgcgcgtcgaagaa
gcctga
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