KEGG   Trinickia caryophylli: U0034_18385
Entry
U0034_18385       CDS       T09722                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
tcar  Trinickia caryophylli
Pathway
tcar00061  Fatty acid biosynthesis
tcar00071  Fatty acid degradation
tcar01100  Metabolic pathways
tcar01212  Fatty acid metabolism
tcar02024  Quorum sensing
tcar04146  Peroxisome
Module
tcar_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    U0034_18385
   00071 Fatty acid degradation
    U0034_18385
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    U0034_18385
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U0034_18385
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:tcar01004]
    U0034_18385
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcar04147]
    U0034_18385
Enzymes [BR:tcar01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     U0034_18385
Lipid biosynthesis proteins [BR:tcar01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   U0034_18385
Exosome [BR:tcar04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   U0034_18385
  Exosomal proteins of breast cancer cells
   U0034_18385
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2 DUF5423
Other DBs
NCBI-ProteinID: WQE11684
LinkDB
Position
1:complement(4068222..4069994)
AA seq 590 aa
MNESIAAQRPPGVAAEAPPAPPRAAPDTDGIWYASYPPDVPREIDVGRYASVAHFFDECT
TRFRERTAFVSVGSSMTYGTAAAKAKAFAAYLQSIGIERGDRVAIMLPNTFQYPIALFGA
LKAGAVVVNVNPLYTPRELAHQLQDSGAKAIVVFENFAATLAAALPGTAVEHIVVTALGD
LLADGLNLKGRLLNFVLKHVKKMVPPYRLAHAIDMRRALALGAAAPFAPTVLTHDDLAFL
QYTGGTTGVAKGAMLTHGNIVANLLQATAWAESQLSDEIETVLTPLPLYHILSLTLNGLI
FLGLGGRNILIANPRDVKRVMQILRKETFTGILAINTLYKSFLENETFCRRDFSKLKLAM
AGGMGTQRAVAERFKAVTGKPIVEGYGLTECSPIVAMNPVDLAHLREFDGSVGLPAPSTR
VRFRKDDGTWANVGEPGELCVKGPQVMKGYWGRPEETAKVIDADGWLATGDIGVMDAQGF
IKLIDRKKDMILVSGFNVYPSEIEDVIAMHPGVREVAAIGVPDETQGERVKVFIVPREPG
LTEEEVIRHCRRNLTGYKVPKLIEFREALPQTNVGKILRRALREDELSRK
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgaatgaatccatcgccgcacaacgcccgccaggcgtggcggccgaggcaccaccggca
ccgccgcgggccgcccccgacaccgacggcatctggtacgcgtcgtatccgcccgacgtg
ccgcgcgagatcgatgtcggccgctatgcgtccgtcgcgcatttcttcgacgaatgcacc
acgcgctttcgcgaacgcaccgccttcgtcagtgtgggctcgtcgatgacatatggcacc
gcagccgcaaaagcgaaggcattcgcagcctacttgcaaagcatcggcatcgagcggggc
gaccgcgtcgcgatcatgctgcccaacacgtttcaatacccgatcgccctcttcggggcg
ctgaaggcgggggccgtggtggtcaacgtcaacccgctctacacgccgcgcgagctcgcg
catcagctgcaggacagcggtgccaaggccatcgtcgtattcgagaacttcgcggccacg
ctcgccgccgcactgcccggaacggccgtcgagcacattgtcgtgactgcgctgggcgac
ctccttgccgacggcctcaacctcaaaggacgcttgctcaatttcgtgctcaagcacgtg
aaaaaaatggtgccgccctaccgcctggcgcacgcgatcgacatgcgccgcgcgcttgcg
ctcggcgcagcggcgcctttcgcgccgacggtgctcacgcacgacgacctcgccttcctt
caatacacgggcgggacgacgggtgtcgccaagggtgcgatgctgacccacggcaacatc
gtcgcgaacctgctgcaggcgacggcgtgggcggaaagccagctcagcgacgagatcgaa
acggtgctcacgccattgccgctttaccacatcctctcgctgactttgaacggtctgatt
tttctcggtctcggcgggcgcaacattctgatcgccaacccgcgtgacgtgaagcgcgtc
atgcagattctgcgcaaggagacgttcaccggcattctcgccatcaataccctctacaag
tcctttctcgagaacgagacgttctgccggcgcgacttctcgaagctgaagctcgcgatg
gccggcggcatgggcacgcagcgcgcggtcgccgaacgcttcaaggccgtgacgggcaaa
ccgatcgtcgaaggctacgggctgaccgaatgctcgccgatcgtcgcgatgaatcctgtc
gacctcgcgcatctgcgcgaattcgacggatcggtcggcctgcccgcaccttcgacacgg
gtgcgttttcgcaaggacgacggaacgtgggcgaatgtcggcgagccgggcgagctttgc
gtgaaggggccgcaggtcatgaaaggatactgggggcgccccgaggaaacggcaaaggtg
atcgacgccgacggctggcttgcgaccggcgatatcggcgtgatggacgcgcaagggttc
atcaagctcatcgaccgcaagaaggacatgattctcgtgtcgggattcaacgtctatccg
agcgaaatcgaggacgtcattgcgatgcacccgggcgtgcgggaagttgcggccatcggc
gtgcccgacgaaacccagggcgagcgcgtcaaggtattcatcgtgccgcgcgagcctggc
ctcaccgaggaggaggtgattcgacactgccggcgcaatctgaccggctacaaggtgccg
aagctgatcgagttccgcgaagccttgccgcagacgaacgtcggcaaaatcttacggcgt
gcactgcgtgaggacgaactctcgcggaaataa

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