Trinickia caryophylli: U0034_18785
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Entry
U0034_18785 CDS
T09722
Name
(GenBank) porin
KO
K03285
general bacterial porin, GBP family
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
U0034_18785
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GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
WQE11755
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Position
1:complement(4180037..4181179)
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AA seq
380 aa
AA seq
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MKKSVLAFGVTSAFALAGTAHAQSAVTLYGLIDAGITYTNNQGGSSNVQAQSGAVNGSRW
GLRGSEDLGNGLKAVFVLENGFNIMNGKLGQGSREFGRQAYVGLSSNQFGTITLGRQYDS
VVDYLGPFALTGTQYGGTQAAHPFDNDNLDNSFRVNNAVKYQSVDLAGLKVGGVYGFSNA
SGGFATNRAYSVGASYAYGPFKFGAGYLHLNNSGTNLNSSGAVSDDATFTASTQQTWGAG
ANYTFGAATVGLVFTQTVLSNLTGVGSSASGTSSGLTLGADSARFTNYELNGRYQFTPAI
SVSGAYTYTNSHIAGVDPKWNQFTLQTDYALSKRTDVYLQGVYQHVSDTGSSGIHAVING
LSTSDSNSQVALTVGLRHRF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcagtcctggcgttcggcgtgaccagcgccttcgctctcgcaggcacggcc
cacgcgcaaagcgcggtaaccctctacggcctcatcgacgccggcatcacctatacgaac
aaccaaggcggcagcagcaacgttcaggcgcaaagcggtgccgtcaacggcagccgctgg
ggcctgcgcggcagcgaggacctcggcaacggcctgaaggcggtgttcgtgctcgagaac
ggcttcaacatcatgaacggaaagctgggccagggtagccgcgagttcggccgccaggca
tacgtcggcctgtcgagcaaccagttcggtacgatcacgctgggccgccagtacgattcc
gtcgtcgactacctcgggccgttcgcgctgaccggcacgcagtacggcggcacgcaggcc
gcgcacccgttcgacaacgacaacctcgacaactcgtttcgcgtcaacaacgccgtcaag
tatcagagcgtggatctggccggcctgaaggtagggggcgtgtatggcttctcgaacgct
tcgggcggcttcgcgacgaaccgtgcctacagcgtgggcgcgtcgtacgcctacggtccg
ttcaagttcggcgccggctatctgcacctgaacaacagcggcacgaacctgaactcgagc
ggcgcggtgagcgacgatgcgacctttaccgcaagcacgcagcagacgtggggcgccggt
gcgaactacacgttcggtgcggcaaccgtcggcctcgtgttcacgcagacggtgctcagc
aatctgaccggggtcggctcttcggcatcgggaacgtcgagcggcctcacgctgggcgcc
gacagcgcccgcttcaccaactacgaactgaacggccgttatcagttcacgccggcgatt
tccgtgtcgggtgcctacacctatacgaacagccacattgccggcgtcgatccgaagtgg
aatcagttcacgctgcaaacggactatgcgctttcgaagcgcacggacgtttatctgcag
ggcgtgtatcagcacgtgagcgatacgggttcgagcggcatccatgccgtgatcaacggc
ttgtcgacgtcggattcgaactcgcaagtggccctgaccgtcggcctgcgtcaccgcttc
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