Trinickia caryophylli: U0034_19280
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Entry
U0034_19280 CDS
T09722
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar03030
DNA replication
tcar03430
Mismatch repair
tcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0034_19280
03430 Mismatch repair
U0034_19280
03440 Homologous recombination
U0034_19280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcar03032
]
U0034_19280
03400 DNA repair and recombination proteins [BR:
tcar03400
]
U0034_19280
Enzymes [BR:
tcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0034_19280
DNA replication proteins [BR:
tcar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0034_19280
DNA repair and recombination proteins [BR:
tcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0034_19280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_assoc_2
AAA_14
AAA_22
AAA_5
AAA_18
DUF3646
Mg_chelatase
AAA_2
AAA_19
TsaE
nSTAND3
PIF1
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
WQE11849
LinkDB
All DBs
Position
1:4282708..4284978
Genome browser
AA seq
756 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGARLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGITATPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHMKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVGHLERILAAEGITFEPQALRMLARAADGSMRDALSLTDQAIAYSANQVTEEAVRGM
LGALDQSYLIRLVDALVEVNGARVLEIADEMALRSLSFSAALQDLASLFHRIGWAQFAPA
SVLDEWPEAGDVRRFAQALTPEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
ALGGGFGGPAGPATRTAAVGGSAPARRDAPIATAQPAQSRPAPAPRTDSRTDSQAAPAPA
PDTAMREAAPAPVPADPLEPAEAADPGEPRIPAAEPAALPRAGDAAHDVHDTHDAPAPEA
LAPSAAPARAGGASAALEVLRSAGLRVSTDRGRAAAGPKAAAPVPKPASARAPIVVPAPR
ERRESAAPTAARETPAPTPPWDDGPPLDAQYDNGLSSFAEEAYFATLDGGQDTAPAAART
NQQGMRAPEIDLSTLAPAITLEPIGFAGDWPTLAAELGLTGVAHQLAFNSELTALEGETL
TLVVPVPQYAESTQVAKLKAALAERLGKMVEVNVSVGAARRTAAALDAAARAERQREAER
EIDADPFVQSLIREFGATIVPGSIKPLGPDAGAAAH
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcgtcgctcgtcgga
caggaacacgtcgtgcgtgcgctcacgcacgcgcttgacggcgcgcgcctgcaccacgct
taccttttcaccggcactcgcggtgtcggcaagaccacgctttcgcgcatcttcgcgaaa
gcgctgaactgcgaaacggggatcacggccactccgtgcggagtgtgccgcgcctgccgc
gagatcgatgaggggcggttcgtcgattacgtcgaaatggacgccgcgagcaaccgcggc
gtcgacgaaatggccgcgcttctcgagcgggctgtgtacgcccccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaatcacgccttcaacgcgatgttg
aagacgctggaagagccgccgccgcacatgaagttcattttggcgacgactgatccgcag
aagatccccgttacggtgctttcgcggtgcctgcagttcaatttgaagcagatgccggct
ggccacattgtcggccacctcgagcgtattctcgcggcagagggcatcacgttcgagccg
caggcgctgcggatgttggcgcgggcggccgacggcagcatgcgcgatgcattgtcgctg
actgaccaggccatcgcctattcggccaatcaggtcaccgaggaagcggtgcgcggaatg
ctcggcgcgctcgatcaaagctatttgatccggctcgtcgatgcgctcgtggaggtcaac
ggagcccgcgtgctcgaaatcgccgacgaaatggcgctgcgcagcctgtcgttttccgcg
gcgctgcaggacctcgcgagcctgttccatcgcattggctgggcgcagttcgcgccggct
tccgtgctcgacgagtggcctgaggcgggggacgtacggcgcttcgcgcaggcgctcacg
cccgagcaggtacagctcttctatcagatcgcgacgatcgggcgcagcgaattgggtttg
gcgcccgacgaatacgcgggcttcacgatgacgctgctgcgcatgcttgcgttcgagcct
gctctcggcggcggcttcggcgggccggccgggccggccacgcgtacggcggcggtcggg
ggcagcgccccggcgcgccgcgacgcgccgattgcgactgcgcaaccggcacaatcgagg
ccggcgccggctccgcgcaccgattcgcgcaccgattcgcaagccgcgcccgctccggca
cccgatacggccatgcgcgaggccgccccggcgccggttcccgcagacccgctcgagccg
gccgaagctgccgatccgggcgagccccggattccggcggccgagcccgctgcgttgccg
cgcgcaggcgatgcagcgcacgacgtgcatgacacgcatgacgcgcccgcgccggaggcg
cttgctccgtcggccgcgccggctcgagccggtggcgccagtgcggcgctcgaagtgctg
cgcagtgccggattgcgcgtatccaccgaccgcggtcgcgccgccgcggggccgaaggcg
gcggcgcccgtgccgaagcctgcttcggcacgggcgccgatcgtcgtgcctgcgcctcgc
gagcggcgcgagtcggcggcacccaccgccgcccgcgagacgccggcacccacgccaccg
tgggatgacgggccgccgctcgatgcgcaatacgacaacggcctttcctcgtttgccgaa
gaggcatacttcgcgacactcgacggtggccaggacacggcgccggccgctgcgcgcacg
aaccagcagggcatgcgcgcgccggagatcgatctgagcacgctcgcgccggccatcacg
ctcgagccgatcggcttcgcgggcgactggccgacgctcgccgcggagctcggcctgacc
ggcgtcgcgcatcaattggcgttcaacagcgagctgaccgcgctcgagggggagacgctc
acgctcgtcgtcccggtgccgcaatatgccgagagcactcaggtcgcgaagctgaaggcg
gcgctggccgaacggctcggcaagatggtcgaggtcaatgtctccgtcggcgcggcacgc
cgtacggctgcggcgctcgatgcggccgctcgagccgagcggcaacgcgaggccgagcgc
gagatcgacgccgatccttttgtgcagtcgttgattcgcgaattcggcgcgaccatcgtg
ccgggctcgatcaaaccgctggggccggatgccggcgcggcggcgcactga
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