Trinickia caryophylli: U0034_19310
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Entry
U0034_19310 CDS
T09722
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
KO
K06194
lipoprotein NlpD
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
U0034_19310
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GFIT
Motif
Pfam:
Peptidase_M23
LysM
Biotin_lipoyl_2
RnfC_N
Biotin_lipoyl
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
WQE13800
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Position
1:4288946..4289878
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AA seq
310 aa
AA seq
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MFTLRAMRTFSTNGRLAAAQRVICAVALSTLAACATRLDQAPVVDRSGGLGAQPSGAVAT
QSAVPLGPPPPGYYRVKPGDTLYRIALDNGQNYRDIAAWNNLANPNQIEVDQLLRVVPPG
ANAATATPGVATAPVTNGSAVQAAPIAPSSSSASASGAAVPPTIGGSTATTIPPQPAASA
TGSAPAAGGTVNLAWPVKGPIIGNFDDSTNKGVNIGGAEGTPIKAAADGRVVYAGNGLRG
YGNLIIIKHDATYLTAYAHNRTLMVKEGDSVTKGQKIAEMGSSDASRVMLHFEVRKQGKP
VDPMKYLPPQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgttgcgcgcgatgcgaacattcagtacgaacggccggcttgccgccgcccaa
cgcgtcatctgtgccgttgccctgtccacgctcgcggcgtgcgcgacgcggctcgatcaa
gcgcctgtcgtagatcgatcgggcgggctcggcgcgcagccgtcgggggccgtggccacg
cagtcagctgtaccgctcgggccaccccctccgggctactaccgcgtgaagccgggagac
acgctctaccggatcgcgctcgacaacgggcagaactatcgcgacattgccgcatggaac
aatctcgcgaacccgaaccagatcgaggtggaccaactgttgcgcgtggtgccgccgggc
gccaatgcggcgacggcgacgcccggcgtcgcgacggccccggtgacgaacggttcggct
gtgcaggccgctccgatcgcgccgagctcttcttctgcctccgcttcgggtgcggcggtg
ccgccgacgatcggcggctcgacggccacaaccatcccgccgcagcccgcggcctcagcc
acgggaagcgctcctgccgctggcggcacggtgaacctcgcctggccggtgaaaggcccg
atcatcggcaacttcgacgattcgacgaacaagggcgtcaatatcggcggggcggaaggc
acaccgatcaaggccgcggcggacggccgggtcgtctatgcaggaaatgggctgcgcgga
tacggcaatctcattatcatcaagcacgacgcaacgtatctgaccgcatatgcacacaac
cgtactttgatggtaaaagaaggggactcggtgaccaaagggcaaaagatcgccgagatg
ggttcgagcgatgcgagtcgagtgatgttgcatttcgaagtacgcaagcaaggcaaaccc
gttgatccgatgaagtacttgccgccgcaataa
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