KEGG   Trinickia caryophylli: U0034_20140
Entry
U0034_20140       CDS       T09722                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_20140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_20140
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_20140
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: WQE14869
LinkDB
Position
2:181007..183121
AA seq 704 aa
MIFASNENGSGGSPVNAGALNGIGSVAGIASQIGSLAGLPGAGLIGGAARAVQLAQTGLS
LLGKTPESVADAINSVSASGAAQLTQSNRYVTLESPLGQDVLLVNAAIVDEYVSQLSEIH
LDLLSHQSDIDPESLVGQRVKLGLHPERAGLSEAMIVARPDTNTRYFDGYVASFARVGSS
GKVTRYEMSVVPWFWFLTRSTDCRIFQNQTVQQILSTIFVELGFRDYQFDVRMTRKPIEY
VVMYQESYYNFCARLMEQEGLFWTFRYEKDKHVLVVGDTNATFVEMPNQRSIAYHADSAA
SEHNGIARWDEAFEFRVGKIAFRDFNYNRPSSTLMYVEAPTSRLKNKNIGTTERYEYHSL
YDTHDDGKRYARYAMEAEEALARRFNGSGYASAMTTIGRFTLENHPNTAYDGKPYIVLHV
RHEAVNDYTRHGAETPYRNTFTCLPEEVPYRSPRRTPKPHMQGTQAAIVVGPKGEEIYTD
GSRVKLHFLWDRRGKYDGTDSMWIRVSQPWAGSGWGGSAIPRIGQEVIVAYNDGDPDNPV
VVGRVFNGGAANPYHGTSGQTMGIRSQTHKGQGFNELRFSDVAGAEEMFLHAQHDMNTVV
QNAQTTQVLKGDRSIAVAKGHHFTKVSTGNLHDAVTQGNTTQQTPAGVHTIEAKELWIKV
GGEGGTSIHMTADGIELRKGASVIYLDDKNIVVQATRTDINPES
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgatctttgcatcgaatgagaatggcagcggcggcagtcccgtcaatgccggcgcgctc
aatggcatcggctcggtggccggcatcgccagccagatcggctcgctcgccggcctgccg
ggcgcggggctgatcggcggcgcggcacgcgcggttcaactcgctcagacaggtttgtct
ttattgggcaaaacgccggaatcggtagccgatgcgatcaatagcgtatcggcaagcggc
gcggcacagctgacgcaaagcaatcgctatgtcacgctcgaatcgccattggggcaggac
gttttgctcgtgaatgcggcgatcgtcgacgaatacgtcagccaactgagtgaaatccat
ctggatctgctttctcaccaaagcgacatcgatccggaaagtctcgtggggcagcgcgtg
aagctcggcctgcatcccgagcgggcgggcttgagcgaggcgatgatcgtggcgcggccc
gacacgaacacgcgctacttcgacggctatgtggcctcgtttgcgcgcgtgggcagctcg
ggcaaggtgacacgctacgaaatgagcgtggtgccgtggttctggtttctcacgcgctca
acggattgccggatcttccagaatcagacggtgcagcagatcctctcgacgatattcgtc
gagctgggctttcgcgattaccagttcgacgtacgcatgacgcgcaagccgatcgagtac
gtcgtgatgtaccaggagtcctactacaacttctgcgcgcggctgatggagcaggagggt
cttttctggacgttccgctacgagaaggacaagcacgtgctcgtggtgggcgacacgaac
gcgacgttcgtcgagatgccgaaccagaggagcattgcgtaccacgcggacagcgcggcg
agcgagcacaacggcatcgcgcgctgggacgaggcgttcgagtttcgcgtcggcaagatt
gccttccgcgatttcaactacaaccggccttcgtccacgttgatgtacgtggaagcgccc
acgagccggctcaagaacaagaacatcggcacgacggagcgctacgaataccactcgctg
tacgacacgcacgacgacggcaagcgctatgcgcgctacgcgatggaagccgaggaggcg
ctggcgcggcgcttcaacggcagcggctatgcaagcgcgatgacgacgatcgggcgcttc
acgctcgagaaccatccgaatacggcgtacgacggcaagccctacatcgtgctgcacgtt
cgccatgaggccgtgaacgactacacgcggcacggcgccgaaacgccctatcggaacacg
ttcacctgcttgccggaggaggtgccgtatcgatcgccgcggcgcacgccgaagccgcat
atgcagggcacgcaggccgcgatcgtggtcgggcccaaaggcgaggagatctacaccgac
ggtagccgcgtgaagctgcatttcctgtgggaccgacgcggcaagtatgacggcaccgat
tcgatgtggatccgcgtgtcgcagccgtgggccggcagcggctggggcggctcggcgatt
ccgcgcatcgggcaggaggtcatcgtggcttacaacgatggagaccccgacaacccggtc
gtcgtgggccgcgtattcaacggcggtgcggcgaacccgtatcacggcacgagcgggcag
acgatgggtatccgcagccagacgcacaaggggcagggcttcaacgaactgcggttctcg
gatgtggcgggtgcagaggaaatgtttctgcatgcgcagcacgacatgaataccgtcgtg
cagaacgcgcagacgacgcaggtgctgaagggcgaccgctcgatcgcggtggccaagggg
catcacttcacgaaggtgtcgaccggcaatctgcatgatgcggtgacgcagggcaatacg
actcagcagacacccgcaggcgttcacacgatcgaagcgaaggagttgtggatcaaggtg
ggcggggaaggcgggacgtcgatacacatgacggccgatggcatcgagttgcgcaagggc
gcgtccgtgatctacctcgatgacaagaacatcgtcgtgcaggccacgcgtaccgacatc
aacccggaaagctga

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