Trinickia caryophylli: U0034_20215
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Entry
U0034_20215 CDS
T09722
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00910
Nitrogen metabolism
tcar01100
Metabolic pathways
tcar01120
Microbial metabolism in diverse environments
tcar01310
Nitrogen cycle
Module
tcar_M00531
Assimilatory nitrate reduction, nitrate => ammonia
tcar_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
U0034_20215 (nirB)
Enzymes [BR:
tcar01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
U0034_20215 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
NAD_binding_7
NAD_binding_9
Trp_halogenase
AlaDh_PNT_C
NAD_binding_8
Lycopene_cycl
Amino_oxidase
3HCDH_N
Biotin_lipoyl
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-ProteinID:
WQE14883
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Position
2:complement(198813..201245)
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AA seq
810 aa
AA seq
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MMKPRLVVIGNGMAGIRTIEELLALAPDHYDITVFGAEPHPNYNRILLSPVLAGEQTFDD
IVLNPLDWYAQNGINLHLGKAIARIDRKRRCVVAEDGTEAPYDRLLIATGSQPFILPVPG
AQLKGVITYRDIHDTQAMIDAANVKRHAVVIGGGLLGLEAANGLKLRGMEVTVVHLAATL
LERQLDTSAGKLLQRSLEARGLNFLLSKATTEIVGNEAGEVTAVRFKDGDEVAADLVVMA
AGIRPNTTLAEQAGLYCNRGIVVNDTLQTYDPRIYAVGECVSHRGIAYGLVAPLFEQAKV
CANHLALMGIGTYKGSVLSTKLKVTGIDLFSAGDFVGGENTEQIVMSDPAGGVYKKLVIE
DDRLVGACLYGDTSDGAWYFKLLREGRKLGELRDRLMFGESSIGDSGVQGHNRAASMADS
DEVCGCNGVCKGTIVKAITEKGLFTLDDVKKHTKAASSCGSCSGLVEQILMSTVGTSFQE
TPKTKAVCACTERTHDELRKAIREQKLLTHQAVYDFLEWRTPNGCATCRPAINYYLISTW
PHEAADDPQSRFVNERVHANIQKDNTFSVVPQMKGGVTTPDELRRIADVADKYNIPMVKV
TGGQRIDLLGVKKEDLVNVWKDLGMQSGHAYGKSIRTVKTCVGSEFCRFGTQNSTQMGID
LETMLANMWSPHKVKLAVSGCPRNCAEAGIKDVGVIAVDSGWELYVGGNGGIKTEVAQFL
AKVKTPEEVKEYTGAFLQLYREEAHYLDRTVHYLARVGLDYVKRKIVEDAANRKALYERL
LYSLDGLPDPWHARIEGTQQREYIPLTVIE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagccacgactcgtcgtgatcggcaacgggatggccggtatccgcacgatcgag
gagctgctcgcgctggcgcctgatcactacgacatcaccgtgttcggcgccgagccgcat
ccgaactacaaccggattctgctttcgccggtgctcgcgggcgagcagacgttcgacgac
atcgtgctcaatccgctcgattggtatgctcagaacggcatcaatctgcatctcggcaag
gccatcgcgcgcatcgaccgcaagcgccgctgcgtcgtggccgaagacggcacggaagca
ccctacgaccgcctgctgatcgccacgggctcgcagccgttcatcctgcccgtgccgggt
gcacagctcaagggcgtcatcacctatcgcgacatccacgacacgcaggcgatgatcgac
gccgcgaacgtgaagcgtcatgccgtcgtgatcggcggcggcctgctcgggctcgaggcg
gcaaacggcctgaagctgcgcggcatggaagtgacggtcgtgcacctcgccgcgacgttg
ctcgaacgccagctcgacacgagcgccggcaagctgctgcagcgctcgctcgaagcgcgc
gggctcaacttcctgctgtccaaggcgacgaccgagatcgtcggcaacgaagccggcgaa
gtcacggcggttcgcttcaaggacggcgacgaagtcgcggccgatctcgtggtcatggcg
gccggcattcggccgaacacgacactcgccgaacaggccgggctctattgcaatcgcggc
atcgtggtcaacgacacactgcagacgtacgatccgcgcatctatgccgtgggcgaatgc
gtgagccaccgcggcattgcctatggtctcgtcgcaccgctcttcgaacaggcgaaggtc
tgcgcgaaccacctcgcgctgatgggcatcggcacgtacaagggctcggtgctttcgacg
aagctcaaggtcacgggtatcgacctcttctcggctggggacttcgtcggcggcgagaac
accgagcagatcgtcatgtcggatccggccggcggcgtctacaagaagctcgtgatcgag
gacgaccgcctcgtgggcgcatgcctgtatggcgatacgagcgacggcgcctggtacttc
aagctgctgcgcgaggggcgcaagctcggcgagctgcgcgaccggctcatgttcggcgaa
tcgagcatcggcgacagcggcgtgcaaggccacaaccgcgccgcgtccatggccgacagc
gacgaagtgtgcggctgcaacggcgtatgcaagggcacgatcgtcaaggcgatcaccgag
aagggtcttttcacgctagacgacgtgaaaaaacacacgaaggccgcgagttcctgcggc
tcgtgctcgggcctcgtcgaacagatcctcatgagcacggtcggcacgagcttccaggaa
acgccgaagacgaaggccgtgtgcgcctgcacggagcgcacgcacgacgaactgcgcaag
gccatccgcgagcaaaagctgctgacgcatcaggccgtctacgatttcctcgaatggcgt
acgccgaatggctgcgccacgtgccgcccggcgatcaactattacttgatctccacctgg
ccgcacgaagccgccgacgatccgcaaagccgcttcgtcaacgagcgcgtgcacgccaac
atccagaaggacaataccttctcggtcgtgccgcagatgaaaggcggcgtgacgacgccc
gacgagctgcgccgcatcgccgacgtggccgacaaatacaacatcccgatggtgaaggtc
acgggcggccagcgtatcgacttgctcggcgtgaagaaggaagatctcgtcaacgtctgg
aaggacctcggcatgcagtcggggcatgcctacggcaaatcgatccgcacggtgaagacg
tgcgtgggcagcgaattctgccgcttcggcacgcaaaacagcacgcagatgggcatcgat
ctcgagacgatgctcgcgaatatgtggtcgccccacaaagtgaagctggccgtctcgggc
tgcccgcgcaactgcgccgaagccggcatcaaggacgtcggcgtcatcgccgtggatagc
ggctgggagctttacgtcggcggtaacggcggcatcaagaccgaggtcgcgcagttcctc
gccaaggtgaagacgccggaagaggtgaaggaatatacaggcgccttcctgcagctctat
cgagaagaagcgcattacctcgatcgcaccgttcactatctcgcacgcgtggggctcgac
tacgtgaagcgcaagatcgtcgaagatgcggcgaaccgcaaggcgctctacgagcggctg
ctgtactcgctcgacggcctgcccgatccgtggcacgcgcgcatcgaaggcacgcagcaa
cgcgaatacattccgctcacggttatcgaataa
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