Trinickia caryophylli: U0034_20415
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Entry
U0034_20415 CDS
T09722
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tcar03029
]
U0034_20415 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_20415 (bamA)
Mitochondrial biogenesis [BR:
tcar03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
U0034_20415 (bamA)
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_20415 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
WQE15646
LinkDB
All DBs
Position
2:249579..251852
Genome browser
AA seq
757 aa
AA seq
DB search
MAGLAGTTATIQPACAAQPFVVKDVRIEGTRRTEPGTVFSYLPIKRGDTFTDDLASKAIR
ALYATGFFSDVQVSADDDTVIVKVVERAAIATIDFAGIHEFEKDALIKALKSVGLSQGRY
YDRSLVDRAEQELKRQYLTRGFYAAEVRTTVTPVDENRVSVLFSVAEGASAKIRQVGFIG
NEVFTTNQLRDEMQLSSPNWFSWYSKNDLYSKDKLTVDLENVRKFYLNRGYLEFNIESTQ
VSISPDKKDMYLTLTVHEGKPYTVSDIRLAGNLVDREAELTKLIKLRPGERFSADKLQAT
TKAIVDKLGEYGYAFASVNAQPEIDRDRHTVALTLQVDPGRRVYIRHIDIVGNTRTRDEV
VRREMRQLESAWFDSGRLALSKDRINRLGYFTDVEMVTIPVEGAPDQADVEVKVTEKPTG
AITLGAGFSSSDKVVLSAGVSQDNVFGSGTSLAVSVNTAKTYRTLAVTATDPYFTVDGIK
RITDVYYRTSYPLYYSSDSSFRIVSMGGDIKFGIPFSEADTVYLGVGLEQDRFNIDSSTP
QSYKDYVSEFGRVVNNVPLTAGWSRDARDSALVPSRGYYLQANGEVGTPAGETQYYKADL
QAQYYYSFARGYILGLNLQGGYGNGFAGKAYPIFKNYYAGGIGSVRGYETSSLGPRDTST
NDPIGGSKMFVMNLEMTVPLPGTGWDRTLRLFTFVDAGNVWGDEGSSTGANGLRYSYGAG
LEWISPIGPLKLSFGLPIVRHSGDNYQKFQFQIGTSF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctggcggggacgacggcaacgattcaaccggcgtgcgcggcgcagcccttc
gtcgtgaaggatgtccgtatcgaggggacacggcgtacggagccgggcactgtgttttct
tatcttcccatcaagcgaggcgatacgttcaccgacgatttggcgtcgaaagccattcgt
gcactctacgccacggggttcttcagcgacgttcaggtttcggccgacgacgataccgtg
atcgtcaaggtcgtcgagcgcgcggcaatcgcaacgatcgatttcgccggcattcacgag
ttcgagaaggacgcgctcatcaaggcgctgaaaagcgtgggcttgtcgcaaggccgctat
tacgaccggtcactcgtcgatcgggcggagcaggagctcaagcgccaatatcttacgcgc
ggtttttacgcggctgaagtcaggaccacggtcactcccgtcgatgaaaatcgggtgtcg
gttctcttctcggtggccgaaggcgcgagcgcaaagatccgtcaggtcggtttcatcggc
aatgaggtgttcacgaccaaccagctgcgcgacgagatgcagctttcctcaccgaactgg
ttctcgtggtattcgaagaacgacctttattcgaaagacaagctgaccgtcgacctggaa
aacgtccggaagttttatctgaaccgtggctacctcgagttcaatatcgaatcgacgcag
gtttccatctcgcccgacaagaaagacatgtatctcacgctgacggtgcacgagggcaag
ccgtataccgtgtcggatatccggctggccggcaacctcgtcgatcgcgaggcggaactg
acgaaactgatcaagctgagaccgggggagcgattttccgcggataagctgcaggccacg
acgaaagcgatcgtcgacaaacttggcgaatacggctacgcattcgcatcggtcaacgcg
cagccagaaatagaccgtgaccggcacacggtcgcgctgacgctgcaggtcgacccgggg
cggcgcgtctatattcgccacatcgacatcgtcggcaacacgcgtacgcgcgacgaagtc
gtgcgccgcgaaatgcggcagctcgaaagcgcctggttcgattcgggccgccttgcactg
tccaaagaccgtatcaaccggctcggttacttcaccgacgtcgagatggtgacgatcccg
gtcgagggcgcaccggatcaggcggacgtggaagtgaaggtcaccgagaagccgacgggc
gcgattacgctcggtgccggtttctcgtcttccgacaaggtcgtgctgtccgcgggtgtc
tcgcaggacaacgtattcggttcgggcacgagtctggccgtcagcgtcaacacggcgaag
acctatcgaacgctcgccgtgacggcaacggacccgtacttcacggtggacggcatcaag
cggatcacggatgtgtattaccgcacgagctatccgctctattacagcagcgactcgagt
ttccgcatcgtcagtatgggcggggacatcaagttcggcattccgttttccgaggccgac
acggtttatctcggcgtcggcctcgagcaggatcgcttcaatatcgattcgtccacgccg
cagagctacaaggactacgtgagcgagttcggccgcgtcgtcaacaacgtgccactgacg
gcgggctggtcgcgcgatgcgcgcgacagtgcgctcgtgcccagccgcggctactatctg
caggccaatggcgaggtggggacgccggccggcgagacgcaatactacaaggccgatctg
caggcgcagtactactactcgtttgcacgcggctatattctcggcctgaaccttcagggt
ggatacggtaacggcttcgcaggcaaggcctacccgatcttcaagaactactatgcgggc
ggcatcggctcggtgcgaggctacgaaacgagttcgctcggcccgcgcgatacgtcgacg
aacgacccgatcggcggttcgaaaatgttcgtgatgaacctcgaaatgacggtgccgttg
cccggcaccggctgggaccgcacgctgcgcttgttcacgttcgtcgatgcgggcaatgtc
tggggcgacgagggcagcagcaccggtgcgaacggccttcgatacagctatggcgcgggc
ctggaatggatctcgcccatcggcccgctcaagctgtcgttcggcttgccgatcgttcgg
cattccggcgacaactatcaaaagttccagtttcagatcggcacgtcgttctga
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