Trinickia caryophylli: U0034_20445
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Entry
U0034_20445 CDS
T09722
Name
(GenBank) extracellular solute-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_20445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_20445
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
U0034_20445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SepRS_C
Motif
Other DBs
NCBI-ProteinID:
WQE14925
LinkDB
All DBs
Position
2:257821..259128
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AA seq
435 aa
AA seq
DB search
MTWLSRGKTASFRSVAVAALAVSAACAAVMAYGQSSKIITEWDHQTNGNGPKIVRDAADR
FEKQNPGYKVQDSHVLNDSYKTKLKVAFGAGQPPCVFDTWGGGPLGEYVKAGQVVDLTPY
LQKDPAFRDRFLPTAWHAVTYDGKVYGIPTENVSAAVIFYNKDIFKQYGLKPPATWDALM
DVVKTLNAHGIAPFALANKNKWTGSMYYMYLVDRLGGPAVFRRAADRAPGGTFADPVFVE
AGRYIQQLVKAGAFAQGYNGLDYDIGASRRLLYAGRAAMELMGGWEAATIQKENPGFYAK
LDFFPFPSVPGGKGDPRNVIGTVGESFTSISTQCPERDAAFKLVKTIADDVSMQARVAEA
HIPPVKNMAVKDRFLERLGGLVAQAPNVQLWYDQELPPKLGEMHKDTTQALFGLSMTPEA
AAAQMEAAAKTGAGR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggctttcgcgcggcaaaacggcatcgtttcgaagcgtggcggtagcggcactt
gccgtctcggcggcgtgtgcagccgtcatggcgtacgggcagtcatcgaaaatcatcacc
gaatgggatcatcagacgaacggtaacgggccgaagatcgtacgcgacgcggcagaccgc
ttcgagaagcagaatccggggtacaaggttcaggattctcacgtcctcaacgattcgtac
aagaccaaactcaaggttgccttcggggccgggcagccgccgtgcgtgttcgatacctgg
ggtggcgggccgctgggcgagtacgtgaaggcgggccaggtcgtcgatctcacgccctat
ctgcaaaaagatccagcctttcgtgaccgctttcttccgaccgcctggcacgcagtcacc
tatgacggcaaggtgtatggcatcccgacagagaacgtttccgctgccgtcattttctac
aacaaggacatcttcaagcagtacggcctgaagccgcctgccacgtgggacgccttgatg
gacgtggtgaaaacgctgaatgctcacggcattgcaccgtttgcgctcgccaacaagaac
aagtggacgggctcgatgtactacatgtatctcgtcgaccggctcggcggccccgctgtg
tttcgccgcgcggccgaccgtgcgccaggcggcaccttcgccgatcccgtgttcgtcgag
gccggccgatacatccagcaactggtcaaggccggagcgttcgcgcagggctacaacggc
cttgattacgacatcggcgcatcgcggcggctgctctacgcgggccgcgccgcgatggaa
ttgatgggcggctgggaggcagccaccattcagaaggagaaccctgggttctacgccaag
ctcgacttcttcccgtttccgagcgtgccgggcggcaagggcgatccgcgcaacgtgatc
ggcacggtgggggaaagtttcaccagcatttccacgcagtgtcctgaacgcgatgcggcc
ttcaaactcgtcaagacgattgccgacgatgtttcgatgcaggcacgcgttgcggaagcg
catattccgccggtcaagaacatggccgtcaaggatcgattcctcgagcggctgggtggg
ctggtcgcgcaggcgccgaacgtccagctttggtacgaccaggagttgccgccgaagctc
ggcgaaatgcacaaggacacgactcaggcgcttttcggcttgtccatgaccccggaggct
gccgcggcgcagatggaagcggccgcgaaaaccggcgcgggccgctga
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