Trinickia caryophylli: U0034_20725
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Entry
U0034_20725 CDS
T09722
Name
(GenBank) contractile injection system protein, VgrG/Pvc8 family
Organism
tcar
Trinickia caryophylli
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Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
Motif
Other DBs
NCBI-ProteinID:
WQE14980
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Position
2:324288..326939
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AA seq
883 aa
AA seq
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MSENETIGATRIARIGAPAPAVFLHVAVFLPGGRILGAETFRLVKLSGEEKVSEPFEFQL
ELRADTVASGAPPPLRFDQLIGQSITFAIDRPDFSAPAGATREILVGASNGRFAAALASG
AADPTLSVFNGIVTAFSMSEPGVYRATVKPALWKLALTNRYRAIAQKSVAQAIETLMSEH
GVRCTVSGLGGSHNLAQTRIQDWLQAGESDFALLQRLLAKARIHYYFEHTANAHTVVFSN
AAQYPAIPFGRPLRYTYADISALGLAQSDVISQYTYEQSLVTTGVECVLARQQETWDVDA
IPTFETYGAQPGDAGVLPFRQYKQYQYGVSDWQARELAQTVDASRRASAERFSGASTCAQ
LRVGHSFTVVMPQGGAAGMNVQPTLDNRRFVATHVSHEAAAEGDYHNSFDATDASLLITP
FSLEETQQGSLLATVVNADGSTTPKTWRYYAKPNFEMGTSVEIDRDANPTSMQAKGVYVA
FATDRGASGSSAPVWVKLASHMQTVPEVGVTVVVARAQDESELPEIQSIVHANGSRVVTP
SGWTASTSIGNSYSTSYSDGKSIRFGASSDVSSDQTLENAIDIVTAAYATKQYRDTSYSQ
GASYSYSTSEDKEQGLLSRSFSYGSTYGSSWAAQQESFSAIGKTYSQSIVGESSPSAAQP
QASPDPSAVSVSTSTVHGDAYSESTNHGNVKNLSTIDGNSASENTVTRVSSSKSTVTEST
SESLTGKSTSSAVTGMSSNTNVVGVSDDASTIGVSVSRSTIGVQRSLGMTGSTSAINMTG
ASSSVAMTGEQTAVNMVGVSTTVDMQGSSSSVSLVGSATRLNLSGESMDVTLAGVQTQVS
MSSESHIISFMGPGLRMSEEAETPEVKMSNATITIVGIIQIYL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacgagacgatcggtgccacccggattgcgcgcatcggggctccggctccg
gcggtgtttctgcacgttgcggttttcctgcccggcgggcggatactcggtgcggagacg
ttcaggctcgtcaagctgagcggcgaggaaaaggtgtccgagccgttcgaattccagctc
gagttgcgagccgatacggttgcctcgggcgcgccgccgccgctgcgcttcgatcagttg
atcgggcaatcgatcacgttcgcgatcgaccggcccgacttcagcgcgccggccggtgcc
acgcgcgagatactcgtcggtgcatccaacgggcggtttgcggccgcgctcgcgagcggc
gccgccgatcccacgctgtcggtgttcaacggcatcgtcaccgcgttttcgatgagcgag
cccggcgtttatcgcgcgaccgtcaagccggctctctggaagctggcgctcaccaaccgt
tatcgcgcgatcgcgcaaaagagcgtggcgcaggcaatcgagacgctgatgagcgagcac
ggtgtgcgctgcacggtctccggcctcggcggctcgcacaatctcgcgcaaacgcggatc
caggattggcttcaggccggcgaatcggacttcgcactgttgcagcggctgcttgcaaag
gcacgcattcactactatttcgagcacacggccaatgcgcacacggtcgttttctcgaat
gcggcgcagtatccggcgattcctttcggccggccgctgcgctacacctatgcggacatt
tcggcactggggctcgcgcagagcgatgtgatctcgcagtacacgtatgagcaatcgctc
gtgacgacgggcgtcgagtgcgtgcttgcgcgtcagcaggaaacgtgggacgtggacgcg
attccgacgttcgaaacctacggcgcgcagcccggtgacgccggcgtgctgccgttccga
cagtacaagcagtaccagtacggcgtcagcgattggcaggcgcgagagctcgcgcagacg
gtggatgcatcgcggcgggcatcggccgagcgcttcagcggggcgagcacctgtgcacag
cttcgcgtcgggcacagtttcaccgtcgtcatgccccaaggcggcgccgcgggcatgaac
gttcagccgacgctcgacaaccgccgtttcgttgccacgcacgtttcgcacgaggcggcg
gccgagggcgattatcacaacagcttcgacgcgaccgatgcgtcgctgttgatcacgccg
ttttcgctcgaagagacgcagcaaggttcgctgctcgccacggtcgtcaatgcggacggc
agcacgacgccgaagacatggcgatactatgcgaagcccaacttcgagatgggcacgagt
gtcgagatcgatcgcgatgcgaatcccacgtcgatgcaggcgaagggcgtctacgtggca
ttcgcgaccgaccggggcgcgagcggctcttccgccccggtgtgggtcaagctcgcgagc
catatgcaaaccgtgccggaggtcggcgtgacggtggtcgtcgcgcgcgcacaggacgag
tccgagctgcccgagatccagagcatcgtccatgcgaacggctcgcgcgtcgtgacgccg
tccgggtggacggccagcacttcgatcggcaacagttattccacgagctacagcgacggc
aagagcattcgtttcggcgcatcgtcggacgtctcgtcggaccagacgctcgagaacgcg
atcgacatcgtcacggccgcctatgccacgaagcagtatcgcgacacgagctattcacaa
ggcgcgagctacagctactcgacctcggaagacaaggagcagggactgctgagccggtcg
ttttcgtacggatcgacctacggcagcagctgggcggcgcagcaggagagcttttccgca
atcggcaaaacctacagtcaaagcatcgtgggcgagtcgagcccaagtgcggcacagccg
caggcctcgccggatccgagcgccgtgtcggtcagcacgagcacggtgcatggcgatgcc
tacagcgaatcgacgaaccacggcaacgtcaagaacctctcgaccatcgacggaaactcc
gcgtccgaaaacaccgtcacgcgcgtgagttcctcgaagtccaccgtgaccgagtcgact
tccgaatcgctgaccgggaaatcgacgagcagtgccgtcacgggcatgtcgagcaacacc
aacgtcgtcggcgtctccgacgacgcttcgacgatcggcgtgtcggtgagccgctcgacg
atcggcgtgcaacgcagcctcggcatgacgggcagcacgagcgccatcaacatgacgggg
gcctcgtcgtccgtcgcgatgacgggcgagcaaaccgcggtcaacatggtcggcgtgtcc
acgaccgtcgacatgcagggctcgtcgagttcggtgagcctcgtcggcagcgcaacgcgc
ctgaatctctcgggcgagagcatggatgtcacgctggcaggcgtccagacgcaagtctcc
atgtcgagcgaaagccacatcatttcgttcatggggccggggctgcgcatgagcgaagag
gccgaaacgcccgaagtgaagatgtcgaacgcgacgatcacgatcgtcggcatcattcag
atctatctgtga
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