KEGG   Trinickia caryophylli: U0034_21255
Entry
U0034_21255       CDS       T09722                                 
Name
(GenBank) LacI family DNA-binding transcriptional regulator
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tcar03000]
    U0034_21255
Transcription factors [BR:tcar03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    U0034_21255
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 LacI Peripla_BP_4 TetR_N HTH_Tnp_ISL3 HTH_3 HTH_31
Other DBs
NCBI-ProteinID: WQE15083
LinkDB
Position
2:450840..451934
AA seq 364 aa
MSRWPAPPDAPEPVSRARRGTGRSVLGDVARRAGVSTATVSRVFNEPGKVSAEVQARVHE
AARALNWIPNAAGRALASTRTHIVGAIIPTLDNHVFASQVAGMQAVMAAHGFTLLLGCSN
YDPSQALTQVRAMLARGVEAVSVVGEAQPPELFELLENQGVPYVVTYAYRDASPRCCIGF
DNRAAFGQLTSHLLELGHRDFAIIMQPSANNDRVEARLAGIQRSLAERGIAVRPSHRREG
PATLRFGRESLRAIWQAPEPRPSAVICGNDNLALGALLEAEALGIRVPAELSITGFDDIE
LAREIRPALTTMWVDTRAIGERAASALLDMLGGQTAVPGFAVAAELRVRESTGPCRRASS
AIDS
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgagccgctggcccgctccaccggacgcgcccgagcccgtctcgcgcgcccggcgtggc
accggccgctcggtgctcggcgacgtcgccaggcgcgccggggtatccaccgccaccgtt
tcgcgcgtcttcaacgaacccggcaaggtgtccgccgaggtccaggcgcgcgtgcacgag
gcggcgcgggcattgaactggattcccaatgccgccggccgcgcgctcgcatccacccgc
acgcatatcgtcggcgccatcattccgacgctcgacaaccacgtgttcgcgtctcaggtg
gccggcatgcaggcggtcatggcggcgcatggcttcacgctgctcctgggctgctccaac
tacgatccctcgcaggcgctgacacaggtgcgagcaatgctcgcgcgcggcgtggaggcg
gtgtcggtggtcggcgaagcgcagccgcccgaactgttcgaactgctcgagaatcagggc
gtgccttatgtcgtcacttacgcgtaccgcgacgccagccctcgttgctgcatcggcttc
gacaaccgcgccgcgttcggccagttgacctcgcatctgctcgaactcgggcaccgcgat
ttcgccatcatcatgcagccgtcggccaacaacgaccgggtcgaggcacggctcgccgga
atccagcggtcgttggccgagcgcggaatcgccgtgcgtccctcgcatcgccgcgaaggg
cccgcgacgctgcgcttcgggcgcgaaagcctgcgcgcgatctggcaggcccccgagccg
cgaccgagcgccgtcatctgcggcaacgacaatctcgcgttgggcgccctgctcgaagcc
gaggccctcggcatccgcgtgccggccgagctgtcgatcacgggtttcgacgatatcgaa
ttggcccgcgagatccgtcccgcgctgacgaccatgtgggtcgacacacgcgcgatcggc
gaacgcgcggcctctgcactgctcgatatgctcggcgggcaaaccgccgttcccggtttc
gcggttgcagccgaactgagagtgcgcgaatcgaccggtccgtgccgccgcgcgtcctcc
gcgatcgatagctga

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