Trinickia caryophylli: U0034_21435
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Entry
U0034_21435 CDS
T09722
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_21435
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
U0034_21435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_Crp_2
HTH_26
HTH_IclR
HTH_31
MarR_2
HTH_3
TetR_N
HTH_10
HTH_11
MarR
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
WQE15114
LinkDB
All DBs
Position
2:492827..493891
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AA seq
354 aa
AA seq
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MSSTPSDSPPGATGSGTRRARRGTGRVTLSDLAARIGVTKVTVSRALNTPELVSAETLER
VREAVRETGYTPDLVAGSLASNRSRLVVALIPAMAGGVFQETVAALTNELAASGYQLLFG
QSGYDESREDALLDAIIGRRPAGIVLTGVVHSEYARKKLKASGIPVVETWELTRSPLDML
VGFSHPDVGAAAARYLHERGARRPAVVTPGDRRAQVRAEAFVASFAASFGGAHEVPVVSA
PSPATIGDGRQALAHLLEVHPQVDAVFCGADVVAMGVLIEARHRGLAVPGRLKVLGYGDQ
NFAKDADPALSTIRIDGTRIGKLAASMLLQRLETGTVKRRKVDVGFDLISRESA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcactccttccgattccccacccggcgcgaccggcagcggcactcgccgcgcc
cgccgcggcaccggccgcgttacgctcagcgacctcgccgcgcgcatcggcgtgacgaag
gtcacggtatcgcgcgccctcaacacgcccgaactcgtatcggcggagacgctcgaacgc
gtgcgcgaggccgtgcgcgaaacggggtacacgccggatctggtcgcgggctcgctcgcg
tccaatcgcagccggcttgtcgtcgcgctgatcccggccatggctggcggcgtttttcag
gaaaccgtggctgcattgacgaacgaactcgcggcgtcgggctaccagcttctgttcggc
caaagcgggtatgacgaatcgcgcgaggatgcgctgctcgacgccatcatcggccgacgc
ccggccggcatcgtgctcacgggcgtcgttcactccgaatatgcgcgcaagaaactgaag
gcctcgggtattcccgtcgtcgaaacatgggagctcacgcgctcgccgctcgacatgctg
gtggggttttcgcatccggacgtgggagcggcggcggcgcgctacctccatgaacgcggt
gcccggcgcccggccgtggtgacgcccggagatcgccgcgcgcaagtgcgggcggaggct
ttcgtcgcgtctttcgccgcgtcttttggcggcgcgcacgaggtgcccgtcgtcagcgcg
ccgtcaccggccacgatcggagacggcaggcaggcactcgctcatctgctcgaagtccac
ccgcaagtcgacgccgtcttttgcggcgccgacgtcgttgcgatgggtgtgttgatcgaa
gcaaggcaccgcgggctcgcggtacccggccggttgaaggtgctcggctacggcgaccag
aatttcgccaaggatgcggaccctgcgctcagcacgatacgcatcgacggtacgcgcatc
ggcaagctcgcggcgtcgatgctgctgcaacggctcgaaacgggcacggtcaagcggcgg
aaggtcgatgtcggcttcgacctgatctcacgcgaaagcgcctga
DBGET
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