Trinickia caryophylli: U0034_21955
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Entry
U0034_21955 CDS
T09722
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K15782
Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_21955
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
U0034_21955
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Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
HTH_20
HTH_11
HTH_27
TrmB
HTH_IclR
DUF7343
NirdL-like_HTH
HTH_45
Fe_dep_repress
MarR_2
HTH_1
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WQE15654
LinkDB
All DBs
Position
2:complement(619572..620069)
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AA seq
165 aa
AA seq
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MKLDRYDLAILRILARDGRMTKSRLAEEVNLSISPAWERVKRLEESGLIRGYRADIDWAA
AFKGSRIVVEIALARHTAQDMRRFEERVAAAPEVEQCYATGGGVDYVMHVASRDIDHYQR
FIDSLLTDELGIERYFTYVVTKVVKREPGAMPSWATPSGDRAASE
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atcaagctcgaccgctacgatctcgccatcctgcgcatcctcgcgcgcgacgggcgcatg
acgaagtcccgtctcgccgaagaggtcaatctttctatttccccggcctgggagcgggtg
aagcggctcgaggagagcggcctcatccgcggctaccgggccgatatcgactgggccgcc
gcattcaagggcagccgcatcgtcgtcgaaatcgcgctcgcgcgccacaccgcacaggac
atgcgccgtttcgaggaacgcgtggcggctgcgcccgaggtcgaacagtgctatgcgacg
ggtggcggggtcgattacgtcatgcacgtcgcatcgcgcgatatcgaccactaccagcgc
ttcatcgattcgctgctgacggacgagctcggcatcgaacgctacttcacctacgtcgtg
acgaaagtggtcaagcgcgaacccggcgcgatgccttcatgggccaccccttcgggcgat
cgggcggcatcagaatga
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integrated database retrieval system
