Trinickia caryophylli: U0034_22425
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Entry
U0034_22425 CDS
T09722
Name
(GenBank) carbohydrate porin
KO
K07267
porin
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_22425
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_22425
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Ortholog
Paralog
GFIT
Motif
Pfam:
OprB
OMP_b-brl_3
COX26
Motif
Other DBs
NCBI-ProteinID:
WQE15298
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Position
2:722557..723978
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AA seq
473 aa
AA seq
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MVSTSSFSPALRRCTVSVALAFACLGGAGARAAGTSDSADAQPAANANANANGAANGETQ
APQAEQSLWTRDTLLGDIGGVRPWLGKYGVTLGIVETSEYLANLRGGLRRGGTYDGVTTV
TLGVDTEKAFGLKGGSFNVSALQIHGRHLSENNLGTLNTASGIEAQDTTRLWELWYQQSL
LNDRLDVKVGQQAIDQEFMTSQYASTFIGTMFGWPGVPSYDMPSGGPAYPLAALGVRARA
HIAPSLTAMAGIFDGDPLGNDAGNRSGTNFNLHNGALYIGELQYAINQPAEGDGAPGKTT
HTGLPGTYKIGVWYNNGRFADQQTAALHRGNYSFYAVADQMIWRPDPSGARSVGVFARVM
GAPGDRNLASVSANLGVVMKAPFAGRENDSVGLGLAYIKVGNHARASDIDNGYVPRGSET
ALEATYQYQVAPWWQIQGDLQYTFNAGAGQNPNDQTKALRNTFVVGVRTNITF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgacatcctcgttctcgcccgcgctgcgccggtgcaccgtgtccgtcgctctt
gcctttgcctgcctcggcggcgcgggcgcccgtgcagccggtacgtccgattcggccgat
gcccaacccgcggcgaacgcgaacgcgaacgccaacggcgcggcgaatggcgaaacgcaa
gctccgcaagcggagcagagcctctggacgcgcgacacgctgctgggcgacatcggcggc
gtgcgcccatggctcggcaaatatggcgtgacgctcggcatcgtcgaaacgagtgaatac
ctcgccaacctgcgcggcgggctcaggcgcggcggtacctacgatggcgtcacgacggtg
accctcggtgtcgacactgaaaaggcgtttggtctgaaaggcggctcgttcaacgtcagc
gcgctgcagatccacggtcgccacttgagcgaaaacaatctgggcacgctgaacacggcg
agcggcatcgaggcacaggatacgacgcggctgtgggagctctggtaccagcagtcgcta
ctgaacgaccggctcgacgtgaaggtcggtcaacaggcgatcgaccaggagttcatgacg
agccagtatgcgagcacgttcatcggcacgatgttcggctggcccggcgtaccctcatac
gatatgccgagcggcggccccgcgtatccgctggcggcgctcggcgtgcgcgcacgcgcg
cacatcgcgccgtcgctcacggccatggccggcatattcgacggcgatccgctcggcaac
gatgcgggcaaccgcagcggcacgaacttcaatctgcataacggcgccctctatatcggc
gaattgcagtatgcgatcaatcagcccgccgagggcgacggcgcgccgggcaagaccacg
cacaccggtttgcccggtacctacaagatcggtgtctggtacaacaatgggcgctttgcg
gatcagcaaaccgctgcgcttcatcgcggcaattacagtttttacgccgttgccgaccag
atgatctggcgcccggatccgagcggcgcccgcagcgtaggggtgttcgcacgcgtcatg
ggcgcccccggggaccgcaatctcgcgagcgtcagcgccaacctgggcgtggtcatgaag
gcgccgttcgcagggcgagaaaacgacagcgtcgggctcggcctcgcctatatcaaggtg
ggcaaccacgcacgcgcctcggatatcgacaacggctatgtgccgcgcggcagcgaaacg
gcgctcgaggcaacctatcaataccaggtcgcgccatggtggcaaattcagggagacctg
caatacacgttcaatgcgggcgcgggccagaacccgaacgaccagacgaaagcgctgcgc
aacacgttcgtcgtcggcgtgcgcacgaacatcacgttctga
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