Trinickia caryophylli: U0034_23305
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Entry
U0034_23305 CDS
T09722
Name
(GenBank) ABC transporter permease
KO
K10560
rhamnose transport system permease protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_23305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_23305
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
U0034_23305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Sensor_TM1
Motif
Other DBs
NCBI-ProteinID:
WQE15457
LinkDB
All DBs
Position
2:complement(932125..933183)
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AA seq
352 aa
AA seq
DB search
MIRHSTTRSDLLPPTGKHARGAHARRFTDAIVQSRESTLFVVLLLLVGTTALARPQFLNL
QNLRDVLLNVSIVSLLTAGMTVVILMRHIDLSIGSTVGISAYAIGSLYVAFPNMPVVVAL
GAGVAVGAAAGTVNGLFVAIGRVPSLVATLSTLYIFRGADYAWVHGGQINATSLPDAFSR
LATGTVLGVPTLALIAAVVLAAMSMYLKQFRAGREHYAIGSNPEAARLAGIRVERRVFAG
FLLCGAIAGFAGALWLARFGTVDASTAKGIELQVVAAAVVGSVAITGGAGTILGATLGAL
VLGVISIALVVLHVSPFWEQAIEGALIVAAITADTLLARSVARSMMRKRDHG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatccgccattcgacgacacgctccgatttgctgccgccaactggcaagcatgcgcgc
ggcgctcatgcccggcgttttaccgatgcgattgttcagagccgggaaagcacgctattc
gtggttttgctgctgctcgtaggcacaacggcgctcgcgcgcccgcagtttctcaatctt
cagaacctgcgtgacgtgttgctcaatgtctcgatcgtgagcctgctgacggccggcatg
acggtcgtgatcctgatgcgccacatcgacttgtcgataggctcgacagtcggcatcagc
gcctatgcgatcggcagcctttatgttgcgtttccgaatatgcccgtggtggtggcgctg
ggcgcgggcgtggcggtcggtgctgcggcgggcacggtcaacggcctgttcgtcgcaatc
gggcgcgtgccgtcgctcgtcgcgaccttgtcgacgctctacatcttccgcggtgccgac
tatgcgtgggtgcacggcgggcagatcaacgcaacgagcttacccgatgcgttctcgcgc
ctcgccaccggtacggtgctcggtgttccgacgctggcgttgatcgcggcagtggtgctc
gccgcaatgtcgatgtatctgaagcaattccgcgccggccgcgagcactacgcgatcgga
tccaatccggaggcggcgcggcttgccggcattcgtgtcgagcgccgcgtattcgcggga
ttcctgctgtgcggcgcgattgcgggatttgcgggcgcgctgtggcttgcccgcttcggc
accgtggacgcaagcacagccaagggcatcgaactgcaggtggtcgccgctgccgtagtg
ggcagcgtggccatcaccggcggggccggtacgatcctgggggcgacgctcggcgcgctg
gtgctcggcgtgatcagtatcgcgctcgtggtgctgcacgtctcgccgttctgggagcag
gcgatcgaaggcgcgctcatcgtcgccgcgattaccgccgacacgctgctggcccgttcg
gtggcccggagcatgatgaggaagcgcgatcatggttga
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integrated database retrieval system
