Trinickia caryophylli: U0034_23310
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Entry
U0034_23310 CDS
T09722
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_23310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_23310
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
U0034_23310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_22
RsgA_GTPase
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WQE15680
LinkDB
All DBs
Position
2:complement(933180..934706)
Genome browser
AA seq
508 aa
AA seq
DB search
MDQAGQRPRLELRRASKAFGRVRALIDGDLTLWPGEVHALLGENGAGKSTLVKILAGVHR
ADRGQLLIDGIERSFSAPGDARAAGIAVIYQEPTLFYDLSIAENIYMGRQPVDRFGRIDY
AAMQREVDALLGSLGVDLRAGRSVKGLSIADQQVIEIAKALSLNANVLIMDEPTAALSLL
EVERLFAIVRKLRERGVAILFITHRLEEVFALTQRVTIMRDGAKVFDALTSTLDTSSIVA
KMVGRDLDTLYPKANVEPGQTLLSVRGLTRAHVFRDISFDVRAGEIVALAGLVGAGRSEV
VRAIFGIDPVDAGEVRVDGALLPPGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMT
VLGRLTRFGLLSTRGEIALAGLWGQRLRLKAADLLAPVGTLSGGNQQKVVLGKWLATGPK
VLIVDEPTRGIDVGAKAEVYATLSKLVSEGMAVLMISSELPEVLGMADRVLVMHEGRIGA
ELARAEASEERIMAAALGQPGFHLGYAA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggccggccaacggccgcggctcgaactcaggcgtgcgagcaaggcatttggc
cgtgttcgcgcgctcatcgatggcgatctcacgctatggcccggcgaggtgcatgcgttg
ctcggcgaaaacggcgccgggaaatcgacgctcgtgaagattctcgcgggcgttcaccgg
gccgatcgcgggcaactgctgatcgacggtatcgagcgatcgttttcggcgcccggagac
gcgcgcgctgccggcatcgccgtgatctatcaggagccgacgctcttttacgatctctcg
atcgccgagaacatctacatgggccgccagcccgtcgatcgcttcggccgcatcgattac
gcggcgatgcagcgcgaggtggatgcgctgctcggctcgctcggtgtcgatctgcgcgcc
ggacgctcggtgaagggtctttcgatcgcggaccagcaagtgatcgagatcgccaaggcg
ctgtcgctcaacgcgaacgtgctgatcatggacgaaccgacggcggcgctttcgctgctc
gaagtcgagcgtcttttcgcgatcgtgcgcaaactgcgcgagcgcggcgtcgcgattctg
ttcatcacgcatcggctcgaggaagtgtttgcgctgacccagcgcgtgacgatcatgcgc
gatggcgcgaaggtattcgatgcgctgacgtcgacgctcgatacatcgtcgatcgtggcg
aagatggttggccgcgacctcgataccctctatccgaaagccaacgtcgagccgggccaa
acgctgctgagcgtgcgcgggctcacgcgcgcgcacgtatttcgcgacatctcgttcgac
gtacgcgcgggcgagatcgtcgcgctcgcggggctggtgggcgcgggccgtagcgaggta
gtgcgcgcgatattcggcatcgatcccgtcgatgcgggcgaggtgcgtgtggatggcgca
ctgctgccgccgggccggcccgccgccgccgtgcgcgcaggcctcgcgcttgtaccggag
gatcgccgccagcagggcctcgcactcgagttgagcatcgcgcgcaacgcttccatgacg
gtactgggccggctcacgcgtttcggcttgttgtcgacgcgcggcgagatcgcactcgcg
ggcctgtggggccagcggctgcggctcaaggccgccgatctgctcgcgcccgtgggcacg
ctctcgggcggcaaccagcaaaaggtcgtgctcggcaagtggctcgccacgggcccgaag
gtgctcatcgtcgacgaaccgacgcgcggcatcgacgtgggcgcgaaggcagaggtctat
gcgacgctttcgaagctcgtcagcgagggcatggccgtactgatgatatcgagcgaattg
ccggaagtgctcggcatggccgaccgtgtgctcgtcatgcatgaaggccgcatcggcgcc
gagctggcacgcgcggaggcgagcgaagagcggatcatggccgccgcactcggtcagcct
ggatttcacctggggtatgcagcatga
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