KEGG   Trinickia caryophylli: U0034_23645
Entry
U0034_23645       CDS       T09722                                 
Symbol
vgrG
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_23645 (vgrG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_23645 (vgrG)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_23645 (vgrG)
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Sarcoglycan_1 Gp44-like_2nd Gp5_trimer_C
Other DBs
NCBI-ProteinID: WQE15520
LinkDB
Position
2:complement(999740..1002088)
AA seq 782 aa
MSSILPTQAYELKLAPHPAPTSVLKFTGRDALSELYRYDIEFTGPVAGIAMDQVVGRPAK
FIVAPIDPNMNYLRTMFGENAEQFSKMPAAYTVHGVITEFDEFSTSADQTHYRVRLEPAL
ADLNRGVTSRLFQKQSVEEIITDTLRHYGYRAGVDFVFQLRHQYKRHEYTTQYRETTFAF
IQRLCAQEGIWFRWEQKKDRSVVVFGDDLDAYARKQRTVLYRRDSGLESGGMDAIKTLEK
RTRRVPEAVRLHDYNHRQAGVPLLVEENAARDDKTTSGIDYRWGEHYETPEEGKGVARRR
HEAYLANQITFKGTGNPFWLEAGEVMRVDPNPADAKHGIFITSVESSGGRGDSFWLTFEG
IPSDRVWRTPIAVIRRPTIDGILPARITSPGNYKYAYLTEQGWYVIKLPFDLDEWSPGGT
SRPVRFAKPYSGDNYGHHFPMIDGAEVAIVFTDGHPDRPVIIGAMHDSLHPDLVNNLNHT
RNIVRTAAQNELRMEDKEGIEHIHLTTPHQTSELNLGHMVDGDRKERGRGAELRSDGPVA
VRGKGVLVSAEVQEGASGRQLDMTAAKAQLEDAFLLMENLTASAQAARAHLAELEQQKQF
LEQRLNGLQRAVILASAPDGIALTSGQHLQLAASNNLAVSAGGAADIGVFKKLTVAAGEA
ISMFAQKCGMKFLAAKGKIEIQAQTDEMEISALRDLKISSVDGKLILAATKEVWIGAGGS
YIKVTPNGIENGTPGDILEKCASWDKPSAASDRIQMPELPQGVCKDCRTHAAQSRSALTP
RA
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgtcgtcgatcctgcctacacaggcttatgagttgaagctggcgccgcatccggcgccc
acctcggtcctgaagttcacgggcagggatgcgctgagcgagctttatcgatacgacatc
gagtttacgggccccgtggccggcatcgcgatggatcaggtggtgggtcgtcccgcgaag
ttcatcgttgccccgatcgacccgaacatgaactatctgcgcacgatgttcggagagaac
gcggagcagttcagcaagatgccggccgcctatacggttcacggcgtcatcacggagttc
gatgagttctcgacgtccgccgatcagacgcactatcgggtccgcttggagccggcgctc
gccgacctgaaccggggtgtgacgagccggctgttccagaagcagtcggtcgaagagatc
atcaccgatacgctgcgccattacggctaccgggccggcgtggacttcgtgtttcagttg
cgccaccagtacaagcggcatgagtacaccacgcagtatcgcgagacgacgttcgcgttt
atccagcgcctctgcgcgcaagagggcatctggttccgttgggagcagaagaaggatcgg
tcggtggtggtgttcggcgacgatctcgacgcgtacgcgcgcaagcagcgcacggtgctg
taccggcgcgactccgggctcgagagcggcggtatggacgcgatcaagacgctcgagaag
cggacccggcgcgtgcccgaggctgtgcggttgcacgactataaccaccgtcaggcgggt
gtgccgctattggtagaggaaaacgcggcgcgcgacgacaagacgacgagcggcatcgac
taccgctggggcgagcactacgagacgccggaagagggcaaaggcgtcgctcgtcggcgt
cacgaggcgtatctggcgaaccagatcaccttcaagggtaccggcaatccgttctggctc
gaggcgggcgaggtcatgcgcgtcgatccgaatccggccgacgccaagcacgggatcttt
atcacgtccgtcgaatcgagcggcgggcgtggcgattcattctggctgaccttcgagggg
attccatcggatcgggtctggcgcacgcccatcgctgtgatcaggcggccgaccattgac
ggcatcctgccggcgcggatcacgtcgccgggtaactacaagtacgcgtacctgaccgag
cagggctggtatgtgatcaagctgccgttcgatctggacgaatggagcccgggcggtacg
agccggccggtgcggttcgcgaagccgtatagcggcgacaactacgggcatcacttcccg
atgatcgacggggcggaggtggccattgtctttaccgatggtcatccggatcggcccgtg
attatcggggcgatgcacgacagcctgcatccggacctcgtcaacaatctgaatcacacc
cggaacatcgttcgcactgcggcgcagaacgaattgcggatggaggataaggaagggatt
gagcacatccacctgaccacgccgcatcagaccagcgagctcaatctggggcatatggtc
gatggggatcgcaaggagcgtgggcggggggcggagttgcgttcggatgggccggttgcc
gtccgcggtaagggcgtgttggtctccgcagaagtgcaagaaggggccagcggcaggcag
ctcgacatgactgccgcgaaagctcagcttgaagacgcatttttgctgatggaaaacctg
actgccagtgcgcaagccgctcgtgcccacttggccgaacttgaacagcaaaagcagttt
ctcgagcagcggctaaatggattgcagcgcgctgtcattctggcgtcggcgccggacggt
atcgcgctaacgagcggccagcaccttcagttggctgcgagcaataatcttgcggtcagc
gccggaggggccgccgatatcggcgtgttcaaaaaacttacggtcgcagcaggtgaagcg
atttcaatgttcgcgcaaaaatgcgggatgaagttccttgcggcaaagggaaagatcgaa
attcaggcgcagaccgacgaaatggaaatcagtgcactgagggacctgaagatctccagt
gtcgacggcaagctcattctcgcggccaccaaggaggtctggattggagcgggtgggtcg
tatatcaaggtgacgcccaacggcatcgagaacggcacgccgggcgatattctcgaaaag
tgcgcgtcgtgggacaagccctccgctgcgagcgacaggattcagatgccggaacttccg
cagggcgtctgcaaggattgccgaacgcatgcggctcagagccgcagcgccctgacgcca
cgtgcatag

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