Trinickia caryophylli: U0034_23795
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Entry
U0034_23795 CDS
T09722
Name
(GenBank) AAA family ATPase
Organism
tcar
Trinickia caryophylli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
HATPase_c
Pkinase
GAF
GAF_2
PAS_9
PK_Tyr_Ser-Thr
PAS_8
HisKA
PAS
GAF_3
PAS_3
AAA_22
nSTAND1
HATPase_c_2
PAS_4
HATPase_c_5
Toxin_ToxA
Rad17
ATPase_2
ACP_syn_III
Motif
Other DBs
NCBI-ProteinID:
WQE15547
LinkDB
All DBs
Position
2:complement(1029896..1035409)
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AA seq
1837 aa
AA seq
DB search
MYGSLTVAWDDGEYAYCHTRLTRGAGAPAAVLAVVPARERAPGASAERLSHEYGLRDELD
GEWALRPLALLHEEGRPVLIIEDPGAQPLEHMLDRPMDVLRFCRLASAMADALGRVHERG
LVHKDVKPSHIVVDETSASVRFTGFGIATCLPRQRQLPEPPELIAGSLPYMAPEQTGRMN
RSIDARSDLYSLGVTFYRMLTGVLPFSASEPMAWIHCHIAGRPVPPSVLVPGVPVQVSRI
VMRLLAKAAEERYQTAAGLAHDLRRCEAEWRSSGRVDAFALGDGDVCNRLLIPEKLYGRE
REIAALLAVLGRVAGSGEPELVLVAGPAGIGKSSVVHELHKELLPLNGLFASGKFDQYKR
DIPYSTLAEALRSLVRRLLGKAEVELANWRRAIEEALGPNGRLMIDLVPELEVIVGAQPE
VPTLAPQLAQTRFQLVLRRFMGVFARPEHPLVLFLDDLQWLDVATLELLDDLLARPDLRY
LMLVGAYRDNDVGPQHPLARRIEAMRRAGARINEIEIGPLPGDQVAQLTADALRTTPERV
EPLAQTVRAKTDGNPFFIIQFLRELSDKALLGVDRSTGGWRWHIERIRAARHTDNVVELM
AARLASLAPETREALQTLACLGDGATAAMLSAVHGTSEQVLDAHLRDAVRLELVECAAGF
YRFGHDRIQEAAYSLIACEARPRAHLAIGRLLLSNTPEARREECVFDLVSQLNRAVALIT
QQPEREALAELNLMAGKRAKASTAYAAALGYLTIGAALLGGDAWQRQHRLSYALELERAE
CELLTGELEAASARLVALSARAIGTVEQAAVACLRMDVCTAQGRSDIAIEVALDYLRGVG
IHWPANPTDDEVRAEYQEIGRSLGGRSIEALVASPVMTNPEALSTVEVLVKAQTPAIFTD
INLASISICKAVNLSLAHGNCDASCFAYVMLARIAGPRFGDFEAGFRFGQLGYDLVEQRG
LGRFAASTYLVFVIVVARWMKHVRESGPLLSRAFDTANRAGDLLYASYACNNLNSQLLFA
GTPLHEAQDEIERGLAFAQAARFGLVVDIISTQRAFVRSLRGGSPAFGRLDDELVGEPRL
EQRLSESRSLAIAECWYWIRKLQARYLAGRYADAVDAACRAQALLWTSTLFLEEAEFHFY
AALALAAYSDTVAPARRRELVESIAVHHRQLATWARYCPDNFEGRAALVGAEIARIEGRA
FEAQSLYEQAIRSSEDNGFVHNEALASELAAAFFAARDVKIASQAYLRHAHQCYLKWGAG
AKASLLEATHACLRTGEGAPASARPSVNTVEQLDLATVIKLSQAVAGEMDLHKLIDVLMR
TAVEQAGANRGLLVLSQGPAQRIQARATSIGAGVAIRLVDEPVGPAMLSETILRYVLRTR
ERVVVGDAARDSSFSSDPYIENHSVRSVLCVPLIVRARLIGALYLENDLAADVFSPAAIA
VLEVLASQAAATLENARLYRGVVESEAKIRRLVDSNIVGIFIYSEEGRILEANEALLRML
GYDRRDLAAGRIWWRDLTPPEWLERDVRIWEPMLRDTGKVPPFEKEYFRKDGSRVPILIG
VANFDEAGSEGVAFVLDLTEQKQAEAEARENELRYREVQTALAHVNRVTTMGQLAAAIGH
EVKQPIATAVTHAEAGLRFLSAQPPKLAEASQAFSRIIDGAMRAGEVVDRIRRLVRNAPP
SKEPVLLNEAIEEVIAMTRTQAQRGGVSVSVRLAADLPRVRGDRVQLQQAVLNLIVNAIE
AMGSMEDGQRALVVSTKKDASGAAVVTVSDSGPGIEAAERDRLFEPFFTTKATGMGMGLA
ICQTIVDAHAGWLRAAANTPRGAIFEFGVPGEAGAGH
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgggagtttgacagtcgcatgggacgacggcgaatacgcgtactgccacacgcgg
cttacgcgcggtgccggtgcgcctgcggcggtgctggccgtggtgcccgcacgcgagcgt
gcgccgggagcgagcgctgagcgcctgtcgcatgaatacggcttgcgcgacgagctggac
ggcgaatgggcgctgcgcccgctggcactcttgcacgaagaagggcgccccgtactgatc
atcgaggacccgggcgcgcagccgctcgagcacatgctggaccgtccgatggacgtcctg
cggttctgtcgtctggcctcggccatggccgacgcactcggccgcgttcacgagcgcggc
ctcgtgcacaaggacgtcaagccctcgcacatcgtcgtggacgagacgagcgcatccgtg
cggttcaccgggttcggcatcgccacttgcctgccgcggcagcgtcaactgcccgagccg
ccggagctcattgcaggcagtctcccctacatggcgcccgagcagaccggccgcatgaat
cgctcgatcgatgcacgctccgatctgtactcgctgggcgtcacgttctatcggatgctc
accggcgtgctgccgttcagcgcctccgagccgatggcgtggattcactgccatatcgcc
ggacgtccggttccaccctccgtgctggtcccgggcgtaccggttcaagtgtcgcggatc
gtcatgaggctcttggccaaggcggccgaggagcgctatcagacggcggccgggcttgcg
cacgaccttcgccgctgcgaggccgagtggcggtcgtccgggcgggtcgatgcgtttgcg
ctcggagacggagatgtctgcaaccggctgctgattcccgagaagctttacggccgcgag
cgcgagatcgccgcgctgctcgccgtgctcggccgtgtcgccggaagcggtgagccggaa
ctcgtgctggtggcggggccggccgggatcggcaaatcgtcggtcgttcacgaattgcac
aaggagctgctgccgctgaatggccttttcgcttcgggcaagttcgaccagtacaagcgc
gacattccctattcgacgctcgccgaggcgttgcggtccctggtgcggcggctgctcggc
aaggccgaagtcgagcttgcgaactggcgccgcgctatcgaggaggcgctcggtcccaac
ggccgcctgatgatcgatctcgttccggagctcgaggttatcgtcggcgcgcagccagaa
gtgccgacactcgcgccgcaattggcgcaaacccggtttcaactggtgctgcggcgtttc
atgggcgtgttcgcgcggccggagcatccgctggtcttgttcctggacgacttgcagtgg
cttgacgtggcaaccctcgaattgctcgacgatctgctcgcccgcccggacttgcgctac
ctgatgctggtcggtgcctaccgcgacaacgacgtcggtccgcagcacccgctcgcgcgc
aggatcgaggccatgcggcgggccggagcgaggatcaacgagatcgaaatcgggccgctc
ccaggcgatcaagtcgcgcagttgacggcggacgccctgcgcacgacacccgagcgcgtc
gagccgcttgcgcagacggtgcgggcaaagaccgacggcaatccgtttttcatcatccag
tttttgcgtgagctgtcagacaaggcgctgttgggcgtcgatcgatccacgggcggctgg
cgctggcatatcgagcgtattcgggcggcgcggcataccgataacgtcgtcgagctcatg
gcggcccggctcgcgagcctcgcgcccgaaacccgggaggcgctgcaaacgcttgcctgt
cttggcgatggggcgacggccgcaatgctgtcggcggtccacgggacgtccgagcaagtg
ctggatgcccacctgcgggacgccgtgcggctcgaactggtcgagtgcgcggcgggtttc
taccggttcggacatgaccgcattcaagaggccgcctattcgctgatcgcgtgcgaggca
cgacctcgggcgcaccttgcaatcgggcgtctgcttctctcgaacacgccggaagcgagg
cgcgaggagtgcgtgttcgacctcgtcagccagctcaaccgtgcggttgcgctcatcacg
cagcaaccagagcgcgaggcgctggccgaactgaatctgatggcgggcaagcgtgccaag
gcttcgacggcttacgcagccgcgctcggttacctgacgatcggtgcggcgctgctcggc
ggcgacgcgtggcaacggcagcatcggttgtcgtacgcgctggaactcgagcgggccgaa
tgcgaattgttgaccggcgaactggaggccgcgagcgctcggctcgttgcactatcggcg
cgtgcgatcggcaccgtcgagcaggctgctgtggcctgtttgcgcatggatgtttgcacg
gcgcagggccgcagcgacatcgccatcgaagtggcgctcgactacctgcggggcgtgggc
atccactggcccgcgaatccaaccgacgacgaagtccgtgccgaatatcaggaaatcggc
cgttcgctcggggggcgctcgatcgaagcgctcgtcgcgtcgccagtcatgacgaacccg
gaggcgctctcgaccgtggaggtcctcgtcaaggcgcagacgccggcaatattcaccgat
atcaatctcgcgtcgatatcgatctgcaaggcggtcaacctgagtctcgcgcacggcaat
tgcgacgcttcgtgtttcgcctacgtgatgctcgcgcgcatcgcgggcccgcgcttcggc
gatttcgaggcgggtttccgtttcgggcaactcggctacgatctcgtcgagcagcgcggg
ctggggcgcttcgcggcgagcacgtacctcgttttcgtcatcgtcgtggcgcgctggatg
aagcatgtgcgcgaaagcggccccttgctgtcccgcgcgttcgatacggccaatcgggcc
ggcgacctgctctacgcgtcatatgcctgcaacaacctcaactcgcaattgctctttgcg
ggtacgccgctgcatgaagctcaagacgaaatcgagcgcggcctcgcgtttgcgcaagcg
gcgcgtttcggtctcgtcgtcgacatcatttccacacaacgcgccttcgttcgctcgctg
cgcggcggctcgcccgctttcggccgtctcgacgacgagctcgtgggcgaaccccggttg
gagcagcgcctgtccgaaagccgctcgctcgccatcgccgagtgctggtactggattcga
aagctgcaagcccggtacctggccggtcgctatgcggacgccgtcgatgccgcgtgccga
gcgcaagcgttgctgtggacatcgacgctctttctcgaggaagcggagtttcacttctat
gcggccctggcgcttgccgcgtacagcgatacggttgcgccggcgcgccggcgggaactc
gtcgaatcgatcgccgttcatcatcggcaactggccacctgggcgcggtattgtccggac
aatttcgagggccgcgcggcgctcgtaggcgcggagatcgcgcgtatcgaggggcgtgcg
ttcgaggcgcagtcgctttacgaacaggctattcgctcgtcggaagacaatggtttcgtt
cacaacgaggcgcttgccagcgagcttgcggcggcgttcttcgccgcgcgcgacgtcaag
atcgcttcgcaggcgtatctgcgccacgcgcatcagtgctatctgaaatggggggccggc
gccaaagcctcgttgctcgaggccacgcatgcgtgcctgcggaccggcgaaggcgcgccg
gcttccgctcgaccctccgtcaacacggtcgaacagttggaccttgccacggtaatcaag
ctgtcgcaggccgttgccggcgaaatggatctgcacaagctgatcgacgtgctcatgcgc
accgccgtcgagcaggcgggggcgaatcgcggtttgctcgtgctttctcagggcccagcg
cagcggatccaggcgagggcgacgagcatcggcgcaggcgtggcgatacggcttgttgac
gagcctgtcggccctgccatgctgtcggagacgattcttcgctatgtcctgcgcacgagg
gagcgcgtcgtggtgggcgatgccgcgcgcgattcctccttctcctccgatccgtatatc
gaaaaccacagcgtgcgctcggttctctgcgtacccttgatcgtacgggcgaggctgatc
ggtgcgctctacctggagaacgatctggccgccgacgtattttcgcctgccgcgattgcc
gtgctggaggtgttggcgtcgcaggccgccgccacgctggaaaacgcccgcctgtatcgg
ggcgtggtggaaagcgaagccaagatccgccggctggtggattcgaacatcgtcggcatt
ttcatctattcggaggaaggcaggattctggaggccaacgaggccctgttgcgcatgctc
gggtacgatcgacgggatctggccgccggccgtatctggtggcgggatttgacgccgccg
gaatggctcgagcgggacgtgcggatctgggagccgatgctgcgcgacacgggcaaggta
ccgcccttcgaaaaggagtacttccgcaaggacggcagccgggtgccgatcctgatcggc
gtggccaacttcgacgaagcaggctcggagggggtggccttcgtgctggatctgacggaa
caaaagcaggctgaagcggaagcgcgcgagaacgaactacgctatcgcgaagtgcagacg
gcactggcgcacgtcaatcgcgtcacgaccatgggtcaattggcggcggcgatcggtcac
gaggtgaagcagccgattgccacggccgtcacgcatgccgaagcggggctgcggtttctg
agcgctcagccgccgaagctcgcggaggcgagccaggcgttcagtcgcatcatcgatggc
gcgatgcgcgcgggcgaagtggtcgaccgcattcgccgcctcgtccgaaatgcgccgccg
tcgaaggagcctgtcctgttgaacgaagcgatcgaggaagtcatcgccatgacgcgcacg
caggcgcagcgaggcggcgtttcggtcagcgtgcggctggcggcggacttgccgcgggtt
cgaggcgaccgcgtgcaactccagcaggccgtgctgaacctcatcgtcaacgccatcgag
gcgatgggctccatggaggacgggcagcgggcgctcgtcgtcagcacgaaaaaggacgcg
tcgggcgcggcggtcgtgacggtctcggactcgggccccggaatcgaggccgctgagcgc
gaccggctgttcgagccgtttttcacgaccaaggccaccggcatgggaatggggctggcc
atctgccagaccatcgtcgatgcccacgcgggatggctccgagccgctgccaatacgccg
cgcggcgcgatattcgagtttggcgtgcccggtgaggcgggtgccggccactga
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