KEGG   Trinickia caryophylli: U0034_23845
Entry
U0034_23845       CDS       T09722                                 
Symbol
casA
Name
(GenBank) type I-E CRISPR-associated protein Cse1/CasA
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tcar02048]
    U0034_23845 (casA)
Prokaryotic defense system [BR:tcar02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    U0034_23845 (casA)
SSDB
Motif
Pfam: CRISPR_Cse1
Other DBs
NCBI-ProteinID: WQE15685
LinkDB
Position
2:complement(1044683..1046266)
AA seq 527 aa
MNLLDSGTAWLRLRRRDSSVKPGTVYDIADPDVVDVLAPRADFRGALYQLLIGVLQTAAP
PSNLNDWLTFWREPPEPAQLAEWFKPLLPAFTIFGDTAFMQDRDPLNDGNAKSTAELLID
TGSSSNQFFNKQPDWQGLCASCVAQALFTLQINAPLGGRGHLTSLRGGGPLTTLVLPKEA
DASLWNKLWLNVLPLAGEDEAWREDRPLSDKLPWLAATRVSDKNGTETRPEDVHPAHAYW
SMSRRIRLDPDDIVAGACEVCGEKHNTLYRRYRASTYGTDYAGPWQHPLTPYWFDDKDLI
KSPTSLKGSRVARGYRYWLTLTMGENSTEQVARAVWDFNRKGGKADKLKWPGGAVLWCFG
YRMDNMKAEAWHDATLPLVRLASADERHFVDAVRSLLEVSRQSALMLADQVKKARRMDKK
EPAVEQSFWQRSEALFYQVVEQLAKSPQLDDAAQAQAFLSWLAPLRRLVLELFDYWVLCA
PIEEMDMAEVVSARADLQRGLWHAKPHKTMGERIAQYQRESDEAVSR
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgaatcttcttgattctggaacagcttggttgcgcttgcgaaggcgtgacagcagtgta
aagccgggcaccgtctacgatatcgcggacccggatgtagtggacgtgctggcgcctcgg
gcggattttcgcggcgcgttgtaccagttgctgattggggtgctgcaaacggcagcaccg
ccgagcaatctgaatgactggctgacgttttggcgggagccgcccgagccagcgcagttg
gcggagtggttcaagcccctgctacctgcattcacgatattcggggacacggctttcatg
caggaccgagatccgctgaacgatgggaatgccaaaagtaccgctgagttgttgatcgac
accggttctagttcgaatcagttctttaacaagcagcccgactggcagggcctgtgcgcc
agttgtgtggcgcaggccttgttcacactgcagatcaacgcgcctctgggtggcaggggg
catctcacatcattgcgcggcggcgggccgttgaccacgttggtgctgccgaaggaagcc
gatgcatcgctatggaacaagctgtggctgaacgtgttgcccctggctggagaggacgag
gcttggcgagaagacaggccactgtcggacaaactgccatggttagcggccacacgcgtg
agcgacaaaaatggcacggaaacccggcctgaagacgttcaccccgcacacgcctattgg
agcatgtcgcgccgaatcaggctggatcctgacgacattgttgcgggcgcgtgtgaggtc
tgcggagagaagcacaacacgctgtatcgccggtaccgggcaagcacttatggcaccgat
tacgccggcccttggcaacatccgctcacgccttattggttcgatgacaaggacttgatc
aagtcgccgacttcgttgaagggctcacgcgtcgctcgcggctaccgctattggctgacc
ctgacgatgggcgagaacagtacggagcaggtagcgcgtgcagtatgggacttcaaccgc
aagggcggcaaggccgacaagctgaagtggcccggcggggcggtgctgtggtgcttcggt
tacaggatggacaacatgaaagccgaggcttggcacgacgccacgctgcccttggtccgg
cttgcaagtgccgacgagcgccatttcgtcgatgccgtgcggagcctgctggaggtttcc
aggcagagtgcgctgatgttggctgatcaggtcaagaaggcgcgccggatggacaaaaag
gagccagcggtcgagcagagcttttggcagcgcagtgaggcgctcttctatcaggtagtc
gaacaactggccaagtcgccgcaactggacgatgccgctcaggcgcaagcgttcctctcc
tggctggcgcccttgcggcggcttgtgttggaactgttcgattattgggtgctgtgcgcg
cctatcgaggagatggatatggccgaggtggtgagcgcccgcgccgatttgcagcgcggc
ctgtggcatgccaagccgcacaagacgatgggcgaacggatcgcccaatatcaaagggag
agcgatgaagccgtttctcgatga

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