KEGG   Trinickia caryophylli: U0034_25085
Entry
U0034_25085       CDS       T09722                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_25085 (tssF)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_25085 (tssF)
SSDB
Motif
Pfam: T6SS_TssF Glyco_hydro_76
Other DBs
NCBI-ProteinID: WQE13985
LinkDB
Position
2:complement(1311125..1312939)
AA seq 604 aa
MENDDPILRYYEAEMRYLRESGKEFAKAHPDRARLLNLDRVGDRDPYVERLHEGFAFLTG
RLQQKLDDELPELTEGLVSLLWPHYLRMIPSLSVVELVPLAEKLQKTEVVSAGVPVRSAP
IAVPPVAGAEGTTPKTVQCLYRTTQAVTLQPLSITHAGATVRHDGRSVIQLGFTLDRSAR
REETDLSRLRLYLNADLPTAFAMHLALTRQVDSIAWRIPEVRNGEVVPLAGVTLEPAGFS
TEERLWPKADAAFSGYQLLLEYFTFREKFLFVDLCGLDVRKLPEGATGFELEIVLKHAYP
SDQRFDADNIRLFCAPVINLFELDAEPIEIDHHETEYRVVPAGHQGEHVETYSVDAIEAF
DHDTAERYEYVPFATFRHRGGMLRHEAPERYFHARVRPGMSGLHESWVVLGGHAWETMAT
LPEESLSLRVTGTNGMLPRKGLREASLNEIAVSTQNVVGVRNLVAPTLPLYPPTGDRFQW
RVLSHLAPNFLSMMNAEVLRGALALYDWTNDELNRRRLAGIAWVSQELLEEVSGGSVERG
VLIEVTLDSHAFAGDGDVMLFGELLHRFFALYAEINLFTKLSIVTLPSQTRTVWPRSKAQ
RATL
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggaaaacgacgatcccatcctgcgctactacgaagcggagatgcgctatctgcgcgag
tcgggcaaggaattcgcgaaggcccatcccgaccgggcgcgcctgctcaacctcgatcgc
gtgggcgatcgcgatccctatgtggagcggcttcatgagggtttcgcgtttctgaccgga
cgccttcagcagaagctcgacgacgaacttccggaactcaccgagggattggtgagcctg
ttatggccgcactatctgcggatgattccgtcgttgtcggtcgtcgaactcgtcccgctc
gcggaaaagctccagaaaaccgaagtggtgtcagcgggcgtaccggtgcgttccgcgccg
atcgcggtgcccccagtggcgggtgccgagggcacgacgccgaagacggtgcagtgcctg
tatcgaaccacgcaggccgtgacgttgcagccactctccatcacccatgccggggcgacc
gtgcgtcacgacggtcgctcggtgatccagcttggcttcacgctcgatcggtcggcccgc
cgcgaggaaacggatctttcgcggctgcgcctatacctcaatgcggacctgccgaccgcg
ttcgcgatgcatctcgcgctcacgcgtcaggtcgattcgatcgcgtggcgtattccggaa
gtccgtaacggcgaagtcgtgccgcttgccggcgtcacgctcgaaccggccgggttctcg
accgaagagcggttatggccgaaggccgacgctgcattctcgggataccagctgctgctc
gaatactttaccttccgcgagaagtttctgttcgtcgacctctgtgggctcgatgttagg
aagctgccggagggggcgaccggcttcgaactcgagatcgtgctgaagcacgcttatcct
tccgaccagcgtttcgatgcggataacattcggctcttctgtgcgccggtcatcaacctg
ttcgagctcgacgccgagccgatcgagatcgaccaccacgagacggaatatcgtgtggtg
ccggccggccaccagggcgagcatgtcgagacgtattcggtcgacgcgatcgaggcgttc
gaccacgataccgccgagcgctacgaatacgtgccgttcgcgaccttccggcatcgcggc
ggcatgctgcgccacgaagcaccggagcggtattttcatgcgcgcgtgcgccccggcatg
tccgggctgcacgagagttgggttgttctcggcggccacgcatgggaaacgatggcgacg
cttcccgaggaaagcctttcattgcgggtgacgggcacgaacggcatgctgccgcgcaag
gggctgcgcgaagccagtctcaatgaaatcgcggtcagcacgcagaatgtcgtgggcgtg
aggaacctcgttgcgccgactctgccgctctatccgcccacaggcgaccgcttccagtgg
cgggtgctgtcgcatctggcgcccaactttctgtcgatgatgaacgccgaggtgttgcgc
ggcgcgcttgcgctttacgactggaccaacgacgagctgaaccgccgtcggctggccggc
atcgcgtgggtatcgcaggaactgctcgaggaggtgtcgggcggctcggtcgagcggggt
gtactgatcgaggtgacgctcgattcgcatgcctttgcgggtgacggcgacgtgatgctg
ttcggcgagctgctgcatcgtttcttcgcgctgtatgccgaaatcaacctgttcacgaag
ctgtcgatcgtgaccctgccgtcgcagacccgcacggtctggccgcgcagcaaagcacaa
cgggcgacgctgtga

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