KEGG   Trinickia caryophylli: U0034_25130
Entry
U0034_25130       CDS       T09722                                 
Symbol
vgrG
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_25130 (vgrG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_25130 (vgrG)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_25130 (vgrG)
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Sarcoglycan_1 DUF4164 Gp44-like_2nd Gp5_trimer_C
Other DBs
NCBI-ProteinID: WQE13993
LinkDB
Position
2:complement(1324449..1326800)
AA seq 783 aa
MSSILPTQAYELKLAPHPAPTSVLKFTGRDALSELYRYDIEFTSPVAGIAMDQVVGRPAK
FIVAPIDPNMNYLRTMFGENAEQFSKMPAAYTVHGVITEFDEFSTSADQTHYRVRLEPAL
ADLNRGVTSRLFQKQSVEEIITDTLRHYGYRAGVDFVFQLRHKYKRHEYTTQYCETTFAF
IQRLCAQEGIWFRWEQKKDRSVVVFGDDLDAYARKQRTVPYRRDSGLESSGMDAIKTLDK
RTRRVPEAVRLHDYNHRQAGVPLLVEENAARDDKTTSGIDYRWGEHYETPEEGKGVARRR
HEAYLANQITFKGTGNPFWLEAGEVMRVDPNPADAKHGIFITSVESSGGRGDSFWLTFEG
IPSDRVWRTPIAVIRRPTIDGILPARITSPGNYKYAYLTEQGWYVIKLPFDLDEWSPGGT
SRPVRFAKPYSGDNYGHHFPLIDGAEVAVVFTDGHPDRPVIIGAMHDSLHPDLVNNLNHT
RNIVRTAAQNELRMEDKEGIEHIHLTTPHQTSELNLGHMVDGDRKERGRGAELRTDGHLA
ARGPQGMLLTTETQNGASGHQLDMTGAKEQLQRAIDRMESLTGAIQAAESTVAELRKQKA
LYAEALDGLKRAAILMSAPAGIGLTSGEHLQVNADQNLIATAGGNFDVGVMHNFTVAAAR
QIALFAQAQGMRLVAAKQDVIMQARTGAMALSASKDLHLTSVDGAIVAASRGAVTLTSGG
AYIKIDGGNIELGCPGDITLKCGNFHWTGPGNLSVPLSAMPIGPCKECLLDAHRGVEAMT
EVA
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgtcgtcgatcctgcctacacaggcttatgagttgaagctggcgccgcatccggcgccc
acctcggtcctgaagttcacgggcagggatgcgctgagcgagctttaccgatacgacatc
gagtttacgagccccgtggccggcatcgcgatggaccaggtggtgggtcgtcccgcgaag
ttcatcgttgccccgatcgacccgaacatgaactatctgcgcacgatgttcggagagaac
gcggagcagtttagcaagatgccggccgcctatacggttcacggcgtcattacggagttc
gatgagttctcgacgtccgccgatcagacgcactatcgggtccgcttggagccggcgctc
gccgacctgaaccgaggcgtcacgagccggctgttccagaagcagtcggtcgaagagatc
atcaccgatacgctgcgccattacggctaccgggccggcgtggacttcgtgtttcagttg
cgccacaagtacaagcggcacgagtacaccacccagtattgcgagacaacgtttgcgttt
atccagcgcctctgtgcgcaagagggcatctggttccgttgggagcagaagaaggatcgg
tcggtggtggtgttcggcgacgatctcgacgcgtacgcgcgcaagcagcgcaccgtgcca
tatcggcgcgactcggggttggaaagctccggcatggacgcgatcaagacgctcgacaag
cggacccggcgcgtgcccgaggccgtgcggttgcacgactataaccaccgtcaggcaggt
gtaccgctattggtagaggaaaacgcggcgcgcgacgacaagacgacgagcggcatcgac
taccgctggggcgagcactacgagacgccggaagagggcaaaggcgtcgctcgtcggcgt
cacgaggcgtatctggcaaatcaaatcaccttcaagggtaccggcaatccgttctggctc
gaggcgggcgaggtcatgcgcgtcgatccgaatccggccgacgccaagcacgggattttt
atcacgtccgtcgaatcgagtggcgggcgtggtgactcattctggctgaccttcgagggg
attccatcggatcgggtctggcgcacgcccatcgctgtgatcaggcggccgaccattgac
ggcatcctgccggcgcggatcacgtcgccgggaaactacaagtacgcgtacctgaccgag
cagggctggtatgtgatcaagctgccgttcgatctggacgaatggagcccgggcggtacg
agccggccggtgcggttcgcgaagccgtatagcggcgacaactacggtcatcacttcccg
ctgatcgacggggcggaggtggcggttgtctttaccgatggtcatccggacaggcccgta
atcatcggggcgatgcacgacagcctgcatcccgatctcgtcaacaacctgaatcacacc
cggaacatcgttcgcactgcggcgcagaacgaattgcggatggaggataaggaagggatc
gagcacattcacctgaccacgccgcatcagaccagtgagctcaatctggggcatatggtc
gatggggatcgcaaggagcgggggcggggggcggagttgcggaccgacggacatctggcc
gcacgtgggccgcaaggcatgttattgaccacggagactcagaacggggcatcggggcac
cagctcgatatgacgggtgccaaggagcaactgcagcgggcaatcgaccgaatggagtca
ctgaccggggccattcaggctgctgaatccacggtagccgaactgagaaagcagaaggcc
ctttacgcggaagcactcgatggcctgaaacgggcagccattctcatgagcgctccagcc
ggcatcggactaacgtcgggtgagcatctgcaggtcaacgccgatcagaacctcatcgcg
acggctgggggcaacttcgacgtaggtgtcatgcacaatttcacggtggcggcagctcgc
caaattgcgctttttgcgcaggcgcaaggtatgagactggttgccgcaaagcaggacgtg
atcatgcaggctcgtaccggcgcaatggcgctgtcggcgtcgaaagatctgcatctgact
agcgtcgatggggcgatcgtggctgcgtcccgcggcgcagtgacactgacaagtgggggg
gcctacatcaagatcgacggtggcaacatcgaactagggtgtcctggcgatatcacactc
aagtgcggcaattttcattggaccgggcctggcaatctgtctgtcccgttatcggcaatg
ccgattggaccatgcaaggaatgcctgctggacgcccatcgcggcgtcgaagcgatgacg
gaggtcgcataa

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