KEGG   Trinickia caryophylli: U0034_25165
Entry
U0034_25165       CDS       T09722                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_25165 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_25165 (tssH)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_25165 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 nSTAND3 Clp_N AAA_24 AAA_25 AAA_7 NACHT Mg_chelatase IstB_IS21 ATPase_2 Zeta_toxin Sigma54_activat NBD_SMAX1 T2SSE Hpr_kinase_C CxC7
Other DBs
NCBI-ProteinID: WQE14000
LinkDB
Position
2:1334220..1336964
AA seq 914 aa
MTPRDTPDLLRQLNPYCAKALEASAGLCQARLADEITVEHWLIKLIEAGDGDIPAILRHY
GIDIDAVWEALLASIAQAPRTLRGKPALSPQLATVLRDAWLHATSESDDAPIRSGNLLQA
IVGAPYVLRARDAWPLLSISGAQIQRLLPRLGPRSCENALDEEASEPDARKSGGAPNAGT
GEAPGAAASNAIGRDTATGEPPRRERTADGDALARFAIDLTGKAHEGRIDPVFGRDREIQ
QVIDVLARRRKNNPILVGEPGVGKTALVEGLALRVAEGSVPNAIRDVRILTLDLGLLQAG
AGVKGEFEQRLKNVIDEVQASPVPILLFIDEAHTLIGAGNAAGGADAANLLKPALARGEL
RTIAATTWSEYKEFFERDAALERRFQIIKVDEPDDEAACLMLRGLKTRYAAYHRVHILDE
AIVAAVKLSRRYIPARQLPDKAVDLIDTAAARVRIGLESPPAELQRARATVSALELELAT
LADDAQAGIEGTPARRDALDAALANARAERAALDERYARELDLVRTLHERREAPPNERDD
ALFDQARKALASAQGKAPLVFADVDAQAIARVVAEWTGVPAGNLVDDELQRLLTLEVQLA
QRVVAQDDALGALAQGLRTAKAGLRSEHAPLGVFLLAGPSGVGKTETALALADILFGGNA
ALTTINMSEYQEAHSVSQLKGSPPGYVGYGRGGILTEAVRQRPYSVVLLDEVEKAHRDVL
DMFYQVFDRGTMRDGEGREIDFRHCVILMTANLGSAQIDDATAAHPEVSHAELLEAIHPQ
LVAHFQPALLARFQTLVYRPLDVPALGAIVRLKLSKIADRLRRQHDIALTCEESLIEAMA
ELCLARESGARNVDAFLDQRILPTVSRELLARMAAGAAPAEIALSSTAEGSLVLDFVDRN
EGDAGRIASAPATA
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgacaccccgagacacgcccgatctgctccgccagctcaacccctattgcgcaaaggcg
ctcgaagcgtccgcgggcctgtgtcaggcccggctcgcggacgagattaccgtcgagcac
tggctgataaagctgatcgaggccggcgacggcgatattcctgccatcctccggcactac
gggatcgatatcgatgccgtgtgggaggccctgctcgcctcgatcgcgcaggcgcctcgc
acactgcgcggcaagcccgcgctctcgccgcagctcgccacggtgttacgggacgcatgg
cttcatgccacctccgaaagcgacgatgcaccgatccgttccggtaatttgctacaggca
atcgtcggcgccccctacgtactgcgcgcgcgcgacgcctggccgctgctgtcgatcagc
ggtgcacagattcagcggctcctcccgcggctcggtccgcgatcgtgcgaaaacgcactt
gatgaggaggccagcgagcccgatgcgcgtaagagcggcggcgcccccaatgcgggcacc
ggcgaagccccaggcgcggcagcgagcaacgcgatcgggcgcgacacggcaacgggcgag
ccgccacggcgcgagcgcacggccgacggcgatgccctcgcacgttttgccatcgacctg
accggcaaggcgcacgaaggccgcatcgatcccgtgttcggccgcgacagggagattcag
caggtcatcgacgtcctcgcacgccggcgcaagaacaacccgatcctcgttggcgagccc
ggggtcggcaagaccgcactcgtggaaggcctggccctgcgcgtggcggaaggcagcgta
ccgaacgcgattcgcgacgtgcgcatcctcacgcttgatctcggcttgctgcaggcgggc
gctggcgtgaagggggaattcgagcaacggctcaagaacgtcattgacgaagtgcaagcc
tcaccggtgcccatcctgctttttatcgacgaagcgcacacgctcatcggcgcgggcaac
gccgccggcggcgcggatgccgcgaacctgctcaagccggcgctcgcgcgcggcgaactg
cgcacgatcgccgccacgacatggtccgagtacaaggagttcttcgagcgcgatgccgca
ctcgagcggcgctttcagatcatcaaggtcgacgagcctgacgacgaggccgcctgtctg
atgctgcgcggcctcaagacacgctatgcggcgtatcaccgggtgcatatcctcgacgag
gcgatcgtcgccgccgtgaagctttcgcgccgctatatccccgcgcggcagctcccggac
aaggcagtggatctcatcgacacggccgccgcgcgcgtgcgcatcggactcgagtctcca
cccgccgagctgcagcgggcacgggcaaccgtcagtgccctggagctcgagctcgccacg
cttgccgacgatgcgcaagcaggcatcgagggcacacctgcgcgccgcgacgcgctcgac
gccgcgcttgccaacgcgcgagcggagcgggcggcactcgatgagcgctatgcgagagag
ctcgatctggttcgaacgctgcacgaacgacgcgaggcaccaccgaacgaacgagacgac
gcattgttcgaccaggcgcgaaaggcactcgccagcgcccagggtaaggctccgctcgtg
ttcgccgacgtcgacgcacaggcgatcgcccgcgtggtggccgagtggaccggtgtgccc
gccggcaacctcgtcgacgacgagcttcagcgcttgctgacgctggaggttcagctcgcg
cagcgcgtggtggcgcaggacgatgcattgggggcgctggcgcaaggcctgcgcaccgcg
aaggcggggctccggagcgagcatgcgccgctcggcgtctttctgctcgcgggaccgtcc
ggcgtcggcaagaccgagacggcactcgcactggccgatattctgttcggcggcaatgcg
gcgcttaccacgatcaatatgtcggagtaccaggaggcacactcggtatcgcagttgaag
ggctcgcccccgggctacgtgggatatgggcgcggcggcattctgaccgaggcggtacgc
cagcggccttatagcgtggtgctgctcgacgaagtggaaaaagcccaccgtgacgtgctc
gacatgttctatcaggtattcgaccgtggcacgatgcgcgacggggagggccgcgagatc
gatttccgccattgcgtcatcctcatgacggcgaacctgggtagcgcacagatcgacgac
gcaacggccgcccacccggaggtttcacacgctgaactgctcgaagccattcatccgcag
ctggtcgcccatttccagccagcactgctcgcccgctttcagaccctcgtctaccggccg
ctcgacgtgcctgcgctcggcgccatcgtgcgcctgaaactgtcgaaaattgcggatcgc
ctgcgacgtcagcacgatatcgcgctgacgtgcgaggagtccttgatcgaggccatggcc
gagctttgcctcgcgcgggaatcgggcgctcgcaacgtcgatgcgtttctcgatcagcgc
atcctgccaaccgtgtcgcgagaactgttggcacgcatggcagcgggtgccgcgccggcg
gagatcgcgctttcgagcacggcggagggcagcctcgtactcgatttcgtcgatcgcaac
gaaggggacgccggccgaatcgcctcggcgccggccacagcctga

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