Trinickia caryophylli: U0034_25360
Help
Entry
U0034_25360 CDS
T09722
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00051
Fructose and mannose metabolism
tcar00541
Biosynthesis of various nucleotide sugars
tcar01100
Metabolic pathways
tcar01250
Biosynthesis of nucleotide sugars
Module
tcar_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
tcar_M01019
GDP-6-deoxy-Tal biosynthesis, GDP-Man => GDP-6-deoxy-Tal
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
U0034_25360 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
U0034_25360 (gmd)
Enzymes [BR:
tcar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
U0034_25360 (gmd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-ProteinID:
WQE14032
LinkDB
All DBs
Position
2:1387427..1388470
Genome browser
AA seq
347 aa
AA seq
DB search
MNATKPARKAIVTGITGQDGAYLAQLLLDKGYAVVGTYRRTSSVNFWRIAELGIEQHPNL
TLVEHDLTDLGSTLRLLERAQPSELYNLAAQSFVGVSFDQPVTTAEVTGVGALNLLEAIR
TLDKSIRYYQASTSEMFGKVQAIPQVESTPFYPRSPYGVAKLFAHWTTINYRESYDIFGA
CGILFNHESPLRGIEFVTRKITDSVARIKAGKLEKLELGNLDAKRDWGFAREYVDGMWRM
LQADEADTYVLATQRTETVRDFVRMAFEAAGYQLEWSGKAENERGIDVATGKVLVEVNPR
FYRPAEVDLLIGCADKARDKLGWQPQTTLEGLCKMMVEADLARVGAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgacgaagcctgcacgcaaagccatcgtcaccggcatcacgggacaggatggc
gcctatctcgcgcaattgctgttggacaagggctacgccgtcgtcggcacctatcggcgc
acgagctcggtcaatttctggcgcatcgccgagctcggcatcgagcagcaccccaacctc
acactcgtcgagcacgacctgaccgacctcggctccacactgcgcctgctcgagagggcg
cagccgagcgaactctataacctcgcggcgcaaagcttcgtcggcgtgtcgttcgatcag
cccgtcacgacggccgaggtgacgggcgtcggcgcgctgaacctcctcgaggcgattcgc
accctcgacaaaagcattcgctactatcaggcgtcgacttccgaaatgttcggcaaggta
caggccattccgcaagtggagagcacgccgttctatccgcgcagcccgtacggcgtcgcc
aagctctttgcgcattggacgaccatcaactatcgcgagtcatacgacatcttcggcgcc
tgcggcatcctcttcaatcacgaatcgccgctgcgcggcatcgagttcgtgacgagaaag
atcaccgattcggttgcgcgcatcaaagcgggcaagctcgagaagctcgagctgggcaat
ctcgacgcaaagcgggactggggcttcgcgcgcgaatatgtcgacggcatgtggcgaatg
ctccaggccgacgaagcggacacttatgtgctcgcgacgcaacgcacggaaacggtacgc
gatttcgtgcgcatggcgttcgaggcagccggctaccagctcgaatggagcggcaaggcg
gaaaacgagcgcggcatcgacgtggccaccggcaaggtgctcgtcgaggtgaacccgcgc
ttttaccggcccgccgaagtcgatctgctgatcggctgcgccgacaaggcgcgcgacaag
ctcggctggcagccgcaaaccaccctcgaggggctctgcaagatgatggtcgaggcagat
ctcgctcgcgttggtgcggcatga
DBGET
integrated database retrieval system