Trinickia caryophylli: U0034_25570
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Entry
U0034_25570 CDS
T09722
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
tcar
Trinickia caryophylli
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
AraC_binding_2
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
WQE14072
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Position
2:1430661..1431497
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AA seq
278 aa
AA seq
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MPIFSDASSIDWEDPDLIPRPVITVGAAGLDMVAVTGNDNARQINSRKEADFHFHRKGQF
LLWMRGVLTCEVAGGFWLVPPGGAIWVPGGLPHRMEAAGTIECYMVYVDPVAGEALPRNC
CTLSTTPLLRELVIRSAALPLRYKEGGMASRLTTLLLDEMALAQPGRVHLPLPTDKRLRT
LVEWIMARPSESGSIDSWARRMSISPRTLSRLVSRETGMSFGRWRRQLHILLALQWLAKG
ATVQDVANGLGYENASNFVVMFRKVLGEPPGRYLKSHD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccgattttcagcgacgcttcgtcgattgattgggaggaccctgacctcatccccagg
ccagtgatcacggtgggagccgccggcctggacatggtggctgtgacgggtaacgacaat
gcgcgtcagatcaatagccgcaaggaagcagacttccacttccatcgaaaaggtcagttc
ctgctttggatgcgcggagtactcacctgcgaggtggccggtggtttctggctggtgcca
ccaggaggcgccatctgggtaccgggtggtctgccacatcgaatggaggcggccggcaca
attgagtgttacatggtgtacgtcgaccctgttgcaggcgaggcgttgccgcgaaactgc
tgcacgttgtcgacaacgccgctgctgcgcgagttggtaatccgttcagcggcattgccc
ttgcgctacaaagaggggggcatggcgtcaagattaacgacgctccttctcgacgaaatg
gctttggcgcagcccgggcgggttcatcttcccctgccaacagacaagcgactgcgcaca
ctcgtcgagtggatcatggcaaggccgtccgaatcgggaagcatcgactcttgggctcgc
aggatgagcatcagcccgcgcacgctctcacgtctggtgtcccgagaaacgggcatgagc
ttcggacgctggcgtagacaacttcatatcctgctcgccctgcaatggctggccaagggc
gcgacggtccaggatgtcgcaaacggtctgggctacgagaacgcgagcaattttgtggtc
atgtttcgcaaagtgcttggcgaaccacctggacgttacttgaaatcgcacgactga
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