KEGG   Trinickia caryophylli: U0034_26000
Entry
U0034_26000       CDS       T09722                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_26000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_26000
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_26000
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1
Other DBs
NCBI-ProteinID: WQE14150
LinkDB
Position
2:1530396..1533167
AA seq 923 aa
MNYQDLPRVSFGPLLSQNNRAFRLKWPKSRQELNQLLLPQYLDIEETLCGGIEGSVLCVS
PTAGIPLTTFMAVPLAVQLVTDSGGLRSICGIVADVQEGESDGGLAAYRLRIRDALSLLE
LRTKTRVFRAMSVLEVVRTLVWEWRNKSSTIAGAFDIDISNLQIDKYPSREQTNQFDESD
AAFIRRLLRREGIGWYIQAGKPGEQDPSKVTAPMHTLVLYDDASQLRQCAVGTVPYGPNP
TVSQRDVVKTLSEGRQLVPGAIRRFSPDYKFDHMERIQGPTRSDQGEAGNDLARLLMDSR
LDSPHLANSPADYERMGLARIKSHDARAVQITGASDIRDLTVGTWVTVSARDRRNSLSTN
ERAITITSLHHRGENNLPKDLSERAQALFAAGRWPFEPPPVSTSTPARPTVLDQSAESRY
ENTFTGVPRGTPLTPAYDPRVDLPRVYPITGKVTAPDGEEVHCDEQGRVYVQIVALASED
HEHAKGMGTSGTEVDSAPVRVLTGLAGDNFGENWAPRKGMEVLLDFQGGDPDKMYVAGIL
HNGANMPATFNNTGALPGNRYVSGTKTKEIKGQRYNQLRFDDTPSEISVQLSSEHAASEV
NLGYLTHPRTNGDGEYRGEGAELRTDAAAALRAAKGILLTTYARSKAAGHQLDRDELTQL
LNECTELFKSLGDYVGQHGGKAANTTGQSAVAAALKTWQASGSGDTPGLMAFGAQAGWVS
VTPKTHVTYAGENIDQVAQQDLQLTSGQRLSATAGQGMQLFARGTGVQAIAGEGPVLVQA
QADTITANAQKGIKIATNENEVVITAPTIRLVAQDGSYIKIGGGVTLGTNGDISLLSASH
KWGGPSTQQAAKTAFDNAPTDQRFRLHYPGEDGDKATAANQAYRITLDDGRVIEGKTDAG
GLTDMVKDDAMRILKVDILKPSL
NT seq 2772 nt   +upstreamnt  +downstreamnt
gtgaactatcaagacctgccacgcgtgtcgttcgggccattgctgtctcaaaataaccgt
gcgttccgcctgaaatggcctaaatcgcgccaggagttgaatcagcttctgctgccgcag
tatctcgatattgaggaaacgctctgcgggggtatcgagggcagcgttttatgcgtatcg
cctaccgcaggcattccgctgaccacgttcatggctgtgccgctggcggtgcagctcgtg
acggacagcggcgggctgcgatcgatctgcggcatagtcgcggatgtacaggaaggcgaa
tcggacggcggccttgccgcctaccggttgcgtatacgcgacgccttgtcgctattggag
ttgcgcaccaagacccgcgtttttcgcgcgatgagcgtgctcgaagtggtgcgtacactg
gtctgggaatggcggaataagagttccaccattgccggcgcattcgacatcgatatctcg
aacctccagatcgacaaatacccctctcgcgaacagacaaatcagttcgacgaatcggat
gcggcgtttatacggcgactactgcggcgtgagggcattggctggtatatacaggcggga
aagcccggtgaacaagacccgagtaaagtgaccgccccgatgcatacgctcgtgctgtat
gacgatgcgagccagcttcggcaatgcgctgtcgggacggtaccttacggcccgaacccg
acggtcagccagcgcgatgtggtgaagacgctgtcggaagggcgacaactggtgcccggc
gcaatccggcgctttagtcccgactacaagttcgaccatatggagcgcatacagggcccg
acgcgctccgaccagggcgaggccggcaacgatctggcgcgcttgctgatggactcccgc
ctcgattccccccatctcgcgaattcgccggccgactatgagcgcatgggattggcaagg
atcaagtcgcatgacgcacgcgcggtacagatcacgggagccagcgatatccgcgacctc
acggtgggtacctgggtgacggtgtcggcacgcgacaggcgcaattcgctctcgacgaac
gagcgcgccatcacgatcacgagcctccatcatcgcggcgagaacaatctgccgaaggat
ctgagcgagcgcgcgcaggcgctcttcgcagctggccgctggcctttcgagccgccgccg
gtgtccacgtcgacgccggcacggcccaccgtattggaccaatcggcggagagccggtac
gagaacacgttcaccggcgtaccccgcggcactccgctcacgcccgcctacgatccacgc
gtcgatctgccccgggtctatccgattacgggcaaggtgacggcgcccgacggcgaagag
gtgcattgcgacgagcaagggcgcgtgtacgttcagatcgttgctctggcttcggaagac
cacgagcatgcgaaagggatgggcacgagcggcaccgaagtcgacagtgccccggtgcgc
gtgttgaccggcttggcgggcgacaacttcggcgagaactgggcgccgcgcaaggggatg
gaggttctgctggatttccaaggcggcgatcccgacaagatgtacgtggcgggaatcctc
cacaacggcgcgaacatgccggccaccttcaacaacaccggagccctgccgggcaaccga
tatgtgtccggcaccaagacgaaggaaatcaaggggcagcgctacaaccagctgcgtttt
gacgatacgccttccgaaatcagcgtccagctgtcgagcgagcatgcggcgagtgaagtc
aatctgggctacctgacgcacccacgcacgaacggcgacggcgaataccgcggcgagggc
gcggagctgcgcaccgatgcggcggcggcactgcgcgcggccaaggggatcttgctgact
acttacgcgcgcagcaaggcggcggggcatcaactcgaccgggacgaactgactcaactg
ttgaacgaatgcacggagcttttcaagtcgcttggcgattacgtcgggcagcacggcggc
aaggcggcgaacacgacggggcagagcgccgttgcggccgcgctgaagacctggcaggca
tcgggctcaggcgacacgccagggttgatggcattcggtgcccaggcgggctgggtgagc
gtgacgccgaaaacgcacgtgacctacgccggggaaaacatcgatcaggttgcgcagcag
gatttgcagctcacgagcggccagcggctgagcgcgacggccggtcaaggcatgcaattg
ttcgcgcgcggcaccggcgtacaggcaatcgcgggcgaaggaccggtgctcgtgcaggcg
caggcggacacgatcacggccaatgcgcagaaaggcatcaagatcgccaccaacgaaaac
gaagtggtcatcacggcgcccacgattcgactggttgcgcaagacggcagctacatcaag
atcggcggcggcgtcacgctcggcacgaacggcgatatcagcctgctgtcggcatcgcac
aagtggggaggaccgtcgacccagcaggcggcaaagacggcgttcgacaatgcgcccacc
gatcagcggttcaggttgcattacccgggggaagacggcgataaggctacggcggccaat
caggcttatcggatcacgctcgacgacggccgggtaatcgaaggcaaaaccgatgcgggc
ggcttgaccgatatggtgaaagacgacgcgatgcgcattttgaaagtcgacattttgaag
ccttcactgtga

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