Trinickia caryophylli: U0034_26730
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Entry
U0034_26730 CDS
T09722
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_26730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_26730
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U0034_26730
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
nSTAND_NTPase5
nSTAND3
AAA_22
AAA_16
AAA_25
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
WQE14281
LinkDB
All DBs
Position
2:1710352..1711452
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AA seq
366 aa
AA seq
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MKTEDVIVSFRGVRKTYDGETLVVKALDLDIYQGEFLTLLGPSGSGKTTCLMMLAGFEFP
TGGEIRLDGQLLNTVPPHKRNIGMVFQNYALFPHMTVAQNVEYPLTVRNVRAAERAARVN
DALKMVRMEGFAKRYPAQLSGGQQQRIALARALVFEPRLVLMDEPLGALDKQLREHMQYE
LKALHEKLGVTFVYVTHDQGEALTMSDRVAVFDKGIVQQLDTVDRLYETPCNEFVASFIG
DSNRLHGTIDDVDGEFCRLRLRDGTQVVGRNVGNARAGTQAVACIRPERLRLASHGNGAA
EGAGNALSSEVRGLIYFGDHVRMRCAVPEQDECFVKVPLGNEALSSFVPGAPVALEFAPE
HLRVFA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggaagacgtgatcgtgagttttcgcggcgtgcgcaagacatacgatggcgag
acgctcgtcgtcaaagcgctcgacctcgatatttatcagggggaattcctgacgctgctc
ggcccctcgggctccggcaaaaccacctgcctcatgatgctggccggcttcgaattcccc
accggcggcgagatccggctcgacggccagttgctcaacacagtgccgccgcacaagcgc
aacatcggcatggtgttccagaactacgcgctctttcctcatatgactgtggcgcagaac
gtggagtatccgcttaccgtgcgcaatgtccgcgcggccgagcgggcggcgcgagtaaac
gacgcgctgaagatggtgcgcatggaaggttttgcgaagcgctaccccgcccagctttcg
ggcggccagcagcagcgcatcgcgctggcgcgcgcgctcgtgttcgagccgcggctcgtg
ctgatggacgagccgctcggcgcgctcgacaagcaattgcgcgaacacatgcaatacgag
ttgaaagccctgcacgagaagctcggtgtgacgttcgtctacgtgacacacgaccagggc
gaggcgctgacgatgtccgatcgcgttgccgtgttcgacaaaggtatcgtgcagcagctc
gatacggtcgaccggctctacgaaacgccttgcaacgagttcgtggccagcttcatcggc
gacagcaaccggctgcacggcacgatcgacgacgtggacggcgagttttgcaggctccgg
ctgcgcgacggcacgcaggtggtcggacgcaacgtcggcaacgcgcgcgctggcacgcag
gcggtggcctgcatccggccggagcggctgcgattggcgtcgcacggcaatggcgccgcc
gagggagccggcaacgcattgtccagcgaggtgcgcgggttgatctatttcggcgaccac
gttcgcatgcgttgcgccgtaccggagcaagacgaatgtttcgtcaaggtaccgctgggc
aacgaggcgctttcgagcttcgtgcccggcgcgccggtcgcactcgagttcgcccccgag
catctgcgcgttttcgcctga
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