Trinickia caryophylli: U0034_26735
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Entry
U0034_26735 CDS
T09722
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_26735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_26735
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U0034_26735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
WQE15736
LinkDB
All DBs
Position
2:1711587..1712582
Genome browser
AA seq
331 aa
AA seq
DB search
MAVAAGANAAELTVVNFGGANADAQKVAYYQPFEKQMGDKLTAVEYNGETAKIKAMVEAK
HVNWDVVEVESGDLGRGCDEGLFEKLDWAKIANKSDLVPESPRTCGVGFFVWSTALAYNA
DKLKTAPTGWADFWDVKKFPGKRALRKGARGNLEFALMADGVAPKEVYKVLATKAGQDRA
FKKLDQLKPNIQWWEAGAQPPQFLVAGDVVMSSAFNGRIDAAQREGKNLKVVWNGSIYDL
DYWVIPKGAPNKALAEKFIAYTVSSKPQQVYAQHIAYGPVNRDAIKSLDAKTLSNLPNSP
ANGKSAVLQDAAFWTDYGDELEQRFAAWASK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgcggccggcgcgaatgcggccgaactgaccgtcgtgaacttcggcggtgcc
aacgcggacgcgcaaaaggtggcgtattaccagccgttcgaaaagcagatgggcgacaag
ctgacggccgtcgaatacaacggcgagacggccaagatcaaggcgatggtcgaggcgaag
cacgtgaactgggatgttgtcgaagtcgaatcgggcgatctcggccgcggctgcgacgaa
ggcctcttcgaaaagctcgactgggcgaagatcgcgaacaaatcggacctcgtgcccgaa
tcgccgcgcacctgcggcgtgggctttttcgtgtggtcgacggcgctcgcttataacgcc
gacaagctgaagaccgctcccaccggctgggccgatttctgggacgtgaagaagtttccg
ggcaagcgtgctttgcgcaagggtgcgcgcggcaatctcgaattcgcgctgatggccgac
ggcgtcgcgccgaaggaagtctacaaggtgcttgcgacgaaggctgggcaggatcgcgcg
ttcaagaagctcgatcagctcaaaccgaacatccagtggtgggaggcgggcgcgcagccg
ccgcaattcctcgtggcgggcgatgtggtgatgtcgtcggcgttcaacggccgcatcgat
gccgcccagcgcgaaggcaagaacctgaaggtggtctggaacggcagcatttacgatctt
gactattgggtgattccgaagggcgcgccgaacaaggcgctggccgagaagttcatcgcg
tacacggtgtcgtccaagccgcagcaggtatacgcgcagcatatcgcctacggtccggtc
aaccgcgatgcgatcaagtcgctcgatgccaagacgctctcgaatctgccgaactcgcct
gccaacggcaagagcgcggtgctgcaggacgcggcgttctggaccgactacggcgacgaa
ctcgagcagcgcttcgccgcatgggcatcgaagtga
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