Trinickia caryophylli: U0034_26875
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Entry
U0034_26875 CDS
T09722
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00020
Citrate cycle (TCA cycle)
tcar00190
Oxidative phosphorylation
tcar00650
Butanoate metabolism
tcar00720
Other carbon fixation pathways
tcar01100
Metabolic pathways
tcar01110
Biosynthesis of secondary metabolites
tcar01120
Microbial metabolism in diverse environments
tcar01200
Carbon metabolism
Module
tcar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tcar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tcar_M00149
Succinate dehydrogenase, prokaryotes
tcar_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
U0034_26875 (sdhA)
00650 Butanoate metabolism
U0034_26875 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
U0034_26875 (sdhA)
00720 Other carbon fixation pathways
U0034_26875 (sdhA)
Enzymes [BR:
tcar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
U0034_26875 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
FAD_binding_3
Thi4
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
Pyr_redox_3
Lycopene_cycl
NAD_binding_8
NAD_binding_7
ThiF
Motif
Other DBs
NCBI-ProteinID:
WQE14308
LinkDB
All DBs
Position
2:1752023..1753798
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AA seq
591 aa
AA seq
DB search
MVAIKNALPRRRFDVVIVGAGGSGMRASLQLARAGLSVCVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPNAVYELEHFGMPFDRNADGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVAAKTQFFVEWMALDLIRDADG
DVLGVTALEMETGDVYILEGKCTLFATGGAGRIFAASTNAFINTGDGLGMAARSGIALQD
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGVGPNKDHVLLDLSHIGAETIMKRLPSIREIALKFANVDCIKEPIPVVPTIHYQ
MGGIPTNIHGQVVGTSKGHEEPVNGFYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVQHVKDIKEHKPLPADAADFALSRLDKLEKSNSGEYTQAIAGDIRSTMQAHAGVFRTS
KLLADGVEKIKELAERTNHVHLKDKSKVFNTARVEALELANLIEVARATMVSAEARKESR
GAHAHSDYEHRDDDNWLRHTLWFSEGDRLDYKPVHMKPLTVESVPPKARTF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaatcaagaatgctctgccgcgtcgccgctttgacgtggtcatcgttggcgcc
ggcggctcgggaatgcgcgcgtcgctgcagctcgcccgcgcgggcctgtcggtttgcgtg
ctctcgaaagtgttcccgacgcgttcgcacacggttgccgcgcaaggcggcatcggcgcg
tcgctcggcaacatgagcgaagacaactggcactaccatttctacgacacgatcaagggt
tccgactggctcggcgaccaggacgcgatcgagttcatgtgccgcgaggcgccgaatgcc
gtgtacgagctcgagcacttcggcatgccgttcgaccgcaacgccgacggcacgatctat
cagcgcccgttcggcggccacacggccaactacggcgaaaagcccgtgcagcgcgcctgc
gcggcggccgaccgtaccggccacgccctgctgcacacgctctaccagcaaaacgtcgcg
gcgaagacgcagttcttcgtcgaatggatggcactcgatctgatccgcgacgcggacggc
gacgtcctcggcgtgaccgcgctcgaaatggaaacgggcgacgtctacatcctcgaaggc
aagtgcacgctcttcgccaccggcggcgcgggccggatcttcgcggcttccacgaacgca
ttcatcaacacgggtgacggcctcggcatggctgcgcgctccggcatcgcgctgcaggac
atggagttctggcagttccacccgaccggcgtggccggcgcgggcgtgctgatcaccgag
ggtgtgcgcggcgaaggcgggattctgcgcaattcgaacggcgagcgtttcatggagcgc
tacgcgccgacgctgaaggatctggcgccgcgcgacttcgtctcgcgttcgatggaccag
gaaatcaaggaaggccgcggggtgggcccgaacaaggaccacgtgctgctcgatctgtcg
catatcggcgccgagacgatcatgaagcgtctgccgtcgattcgcgagattgcgctcaag
ttcgcgaacgtcgactgcatcaaggagccgattcccgtcgtaccgaccatccactaccag
atgggcggcattccgacgaacatccacggtcaggttgtcggcacctcgaagggtcacgaa
gagccggtcaacggcttttacgcggtgggcgaatgctcgtgcgtctcggtgcacggcgcg
aaccgtctgggcacgaactcgctgctcgacctcgtcgtgttcggccgcgcggccggcaat
cacatcgtccagcacgtgaaggacatcaaggagcacaagccgttgccggccgatgccgcc
gacttcgcgctctcgcgtctcgacaagctcgaaaaatcgaattcgggcgagtatacgcag
gcgatcgcaggcgatatccgctcgacgatgcaagcgcacgccggcgtgttccgcacgtcg
aagctgctcgcagacggcgtcgagaagatcaaggaactggctgagcgcaccaaccatgtg
catctgaaggacaagtcgaaggtgttcaacacggctcgcgtcgaagcgctcgagctggcg
aacctcatcgaagtggcccgtgcgacgatggtctcggccgaagcgcgcaaggaaagccgt
ggcgcgcacgcgcacagcgattacgaacaccgcgacgacgacaactggctgcgtcacacg
ctgtggttcagcgagggtgaccgcctcgactacaagccagtgcatatgaagccgctgacg
gtcgaatcggtgccgccgaaggcgcgtacgttctaa
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