Trinickia caryophylli: U0034_28005
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Entry
U0034_28005 CDS
T09722
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_28005
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_28005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MipA
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
WQE14510
LinkDB
All DBs
Position
2:complement(1993542..1995716)
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AA seq
724 aa
AA seq
DB search
MQIKYAQTREARRPTARARLYATFLASIASNLCAAATDAAAPAAATTQRSEQTTQLPTVT
TRTSAQADPTRGYEPRTSAVASATAQSLLDIPQAVAVVSGTVMEDQQARSLDDVLGNVSG
ITQTNTLGGTRDAFIKRGFGENDDGSILVDGMRSPVLHNYLATIDRVEVLKGPASLLYGI
QEPGGVINLVTRKPEDEFHGSVSATRTSHGGSGASFDLTGPIGQAGQVAGGTLAFRLIGE
YDTSRYWRSFGRQRDSLIAPALSWHDAKTSIDVSYQYVDYTMPFDRGTVLVNGHLDDSLR
YRRYEEPWSQSTGIQETFRARVEHRLSDQWKLRASYGWARDRYQQYLTRARSFNSTTGAL
SRSSDANLGRNESDEIATIGAIGELDIAGMRHDVYFGAEYERQRVFRGDTIRGNAVSGFD
LYDPVYGTLAAGGKASASQSDSLTKVHTYSLITQDAVHLTDRLIASAGIRWETYQQYSGV
GRPFVVADDSHGNVWLPQFGLVYKIAPSLAFYANYSRSFKPNVADDVDAPLAPERGQIYE
AGLKFDLKPGIAGTLAVYQIDKHNVAVTVGDVTSTIGSARSRGVELDVAGRLSNHWSLIG
SYAYTDAVDRSDNTPMVNAARHSGSLFAVYNTALPHISGQWRFGGGMRLVGKRPGDTANS
FTLPGYVVADLFAAYETKVGKLPTRVQLNVKNLFDKTYYPSSSSNLIIAVGEARLVTLTT
TVSF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaaatacgcgcagacgcgcgaagcacggcgcccgacggcgcgtgcgcggctt
tatgcaacgttcctcgcatccattgcgagcaacctgtgcgcggcggccaccgacgcagcc
gcgcccgccgccgcgaccacgcagcgcagcgagcagaccacacagttgcctaccgtcacc
acgcgcacgagcgcgcaggccgacccgacacgcggatacgagccgcgcacgagcgccgtg
gcaagcgccaccgcgcaatcgctgctcgacattccgcaggcggtggccgtggtgagcggc
accgtcatggaggatcagcaggcgcgctcgctcgacgacgtgcttggcaacgtgagcggc
atcacgcaaacgaacacgctcggcggcacgcgcgacgctttcatcaagcgaggtttcggc
gagaacgacgacggctcgattctcgtcgacggcatgcgctcgccggttctgcacaattac
ctcgccacgatcgatcgcgtcgaagtattgaagggcccggcgtcgctgctctacggtatt
caggaaccgggtggcgtgatcaatctcgtgacgcgcaagcccgaggacgagtttcatgga
tcggtgtcggccacgcgcacgagccacggcggcagcggtgcgagcttcgacctcacgggg
ccgatcgggcaggcgggacaagtcgccggcggcacgctcgcgtttcgcctcatcggcgaa
tacgacacgagccggtactggcgcagcttcggccggcagcgcgattcgctgatcgccccc
gcgctgtcgtggcacgacgcgaagacgtcgatcgacgtcagctatcagtatgtcgactac
acgatgccgttcgatcgcggcacggtactcgtgaacggccacctcgacgattccctgcgc
taccgccgctacgaagagccgtggtcgcagagcacgggcattcaggagacattccgcgcg
cgtgtggagcatcgcctgtcggaccaatggaaactgcgtgcgagctatggttgggcacgc
gaccgctatcagcaatacctgacccgcgcgcgctcgttcaacagtacgacgggcgcgttg
agccgctcgtcggatgcgaacctcggccgcaacgaatccgacgagatcgcaacgatcggc
gcgatcggcgaactcgacatcgccggaatgcggcacgacgtctacttcggcgcggagtac
gagcggcaacgcgtcttccgcggcgatacgattcgcggcaacgctgtctcgggcttcgat
ctctacgatccggtgtacggcacgcttgcggcgggcggcaaggcgagcgcttcgcaaagc
gactcgttgacgaaagtccacacctactcgctcatcacgcaagacgccgtgcatctgaca
gatcggctcatcgcctcggccggcatccgttgggagacgtaccagcaatattcaggcgtc
gggcggccgttcgtcgtcgccgacgattcgcacggcaatgtctggctgccgcagttcggg
ctcgtctacaagatcgcgccgtcgctcgcgttctacgcgaactacagccggtcgttcaag
ccgaacgtggccgacgacgtcgatgccccgctcgcgccggagcgcgggcagatctatgag
gccggcctcaagttcgatctgaagcccggtatcgccggcacgctcgcggtctaccagatc
gacaagcacaacgtggcggtaaccgtcggcgacgtcacgtcgacgatcggcagcgcccgc
tcgcgcggcgtcgagctcgacgtcgcgggcaggctgtcgaatcactggagcctgatcggc
agctatgcctacacggatgccgtcgatcgctcggacaacacgccgatggtcaacgccgcg
cgtcattcgggcagcctcttcgccgtctacaacacggcgttgccgcatatcagcgggcaa
tggcgcttcggcggcggcatgcggctcgtcggcaagcgccccggcgatacggccaacagc
ttcacgctgcccggttacgtcgtggccgatctgttcgcagcctacgaaacgaaagtcggg
aaactgcccacgcgcgtgcagctcaatgtgaaaaacctgttcgacaagacgtactacccg
tcgagctcgagcaatctgatcatcgccgtgggggaagctcgcctcgtgacgctcaccacc
accgtttcgttctga
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