Trinickia caryophylli: U0034_28195
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Entry
U0034_28195 CDS
T09722
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_28195
Transporters [BR:
tcar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
U0034_28195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Response_reg
SMC_N
AAA_16
AAA_22
AAA_29
AAA
DUF87
ABC_ATPase
Zeta_toxin
AAA_19
AAA_28
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
WQE15757
LinkDB
All DBs
Position
2:2033111..2035783
Genome browser
AA seq
890 aa
AA seq
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MRTRLRRRIAADLWEAVWRYRRETLGAAALMVTAKLAGVSVPLVLRSIIDDLGHPAPLAL
FPVFLVLAYALLRFLGDALGEARDVVFSTVTQHTVASLAERTFARLHRLGARFHAKRETG
AIVRDVQKGTDGVGYLLGVGLFTILPALIEIGTVIAIIATNFTVGFSWIIFATLICYATY
TTIFTRRRMVVQREVNRLESAADSRLVDSMLNYDTVKYFAAEELESDRYRGVLSHWVVAR
LRNQRALTALHLGQSAVVCLGIAATMLLAVQYVTAGRMSLGDLVLVNAYIVQVCMPLNTL
GFVFRETNDALVNVERMFTVLAGESFEEGAEAATDEDRDEPGAPPLAVTAGEIAFEHVEF
GYDPARQILHDVSFRAAPGRTLAVVGGSGSGKSTLVRLLFRLYAPSAGRVTIDGQDLRNV
TRRSLREAIGIVPQDTVLFNETIAYNIGYGRTQATRADIVRAARAAQLDEFIERLPDHYD
TRVGERGLRLSGGERQRIAIARAFLKDPPIIVFDEATSALDTRSERAIQNEFRRLSEGRT
SIVIAHRLSTIVDADRILVMEHGRIVEQGRHDELLARLNGVYARMWALQREQGELEHAQR
RFAAHPRQIGELAAAIAGRVATEAAARAVTFDVEIADPLLPVTGETEEIERVVAMLCANE
IAHAAAGERVALRAQRAENAAWLVAFGARPKPAPLTDEQAADAEQVLGAAGGTFMPASLD
GRVAYVAALPLVPVVPVASPARVTETDGAAQTVAGSAPRLDGIAVLAIDDDEEARDALEA
ALVANGARVALAASGEDAIRRLADTAPTQWPEVVVCDVSLCDEDGCDVLSRIREVARQRT
APPPPAIALTGHADAATRRRTEEAGFGAHLVKPVRIDALAGEIRRLAAHA
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacccgcctcaggcggcgcatcgccgccgacctctgggaggcggtctggcgctat
cgccgggagacgctcggcgcggctgcgctgatggttacggcgaaactggccggcgtctcg
gtaccgctggtattgcgctcgatcatcgacgacctgggccacccggcgccgcttgcactc
tttccggtctttctcgtgctggcctatgcgctgctgcggtttctcggcgatgcgctcggc
gaagcccgcgacgtcgtcttcagcacggtcacgcagcatacggtcgcctcgctcgccgag
cgcacgttcgcacgcctgcaccggctcggcgcgcgttttcacgcgaagcgggagaccggg
gcgatcgtgcgcgacgtgcaaaaaggcaccgatggcgtgggatacctgctcggcgtcggt
cttttcacgatcctgcctgcgctcatcgagatcggcaccgtgattgcgatcatcgcgacg
aatttcacggtcggcttcagctggattatttttgccacgctgatctgctatgcgacgtat
acaacgatcttcacgcggcggcgcatggtcgtacagcgcgaggtgaaccggctcgaatcg
gcggccgacagccggctcgtcgacagcatgctcaactacgacaccgtgaagtacttcgcc
gccgaagaactggagtcggaccgataccgcggtgtgctctcgcattgggtcgtcgcacgg
ctcagaaatcagcgtgcgctgaccgcgctgcatctcggccagagcgcggtggtttgcctc
ggtatcgcggcgacgatgctgctcgccgtgcaatacgtcacggccgggcgtatgagcctg
ggcgatctcgtgctcgtcaatgcctacatcgttcaggtctgtatgccgctcaacacgctg
ggcttcgtcttccgcgaaacgaacgatgcgctcgtgaacgtggagcgcatgttcaccgtg
ctcgcgggcgagagtttcgaagaaggcgcggaggcggccacggacgaggaccgcgacgag
cccggcgcgccgccgctcgccgtcacagctggcgagatcgcgttcgagcacgtggagttc
ggctacgatcccgcacgccagatcctgcacgatgtcagctttcgggcggcgccagggcgc
acgctcgccgtcgtcggcggcagcggatcgggcaaatccacgctcgtacgcctgctcttt
cgtctttatgcgccgagcgcggggcgcgtgacgatcgacgggcaggacctgcgcaacgtc
acgcgccgctcgctgcgcgaggcgatcggcatcgtgccgcaggataccgtgctcttcaac
gagacgatcgcctacaacatcggctacgggcgcacgcaggcgacgcgcgccgacatcgtg
cgcgccgcgcgcgccgcgcagctcgacgagttcatcgagcgcctgcccgaccattacgac
acgcgcgtcggcgaacgcgggctgcggctctcgggcggcgagcgtcagcggattgcgatc
gcgcgcgcgttcttgaaggacccgccgatcatcgtcttcgacgaggccacgtccgcgctg
gacacgcgctccgaacgtgcgatccaaaacgagttccgccgcctctcggagggccggacg
tcgatcgtgatcgcgcaccggctttcgacgatcgtcgacgccgaccgcatcctcgtgatg
gagcacgggcgcatcgtcgagcagggccggcacgacgaactgctggcgcggctcaatggc
gtctatgcgcggatgtgggcgctgcagcgcgagcagggtgaactcgagcatgcacagcgc
cgattcgccgcgcatccgcggcagatcggggagctggccgcggcgattgccgggcgcgtg
gcaaccgaggccgcggcgcgcgcagtcacgttcgatgtggagattgccgacccgctgttg
cccgtgaccggcgagacggaggaaatcgagcgcgtggtggcgatgctctgcgcgaacgag
atcgcgcatgcggcggcgggcgagcgcgtcgcattgcgggcgcaacgggcggagaacgcc
gcgtggctcgtcgcgttcggcgctcggccgaagccagcgccgctcaccgacgagcaggcc
gccgatgccgagcaagtgctcggcgcggccggtggcacgttcatgcccgcttcgctcgat
ggccgcgtagcctatgtggcggcgctgccgctcgtgccggtggtgccggtggcttcgccg
gcacgcgtgaccgagaccgatggcgccgcgcagaccgttgcgggttcggcgccgcggctc
gacggtatcgcggtactggccatcgacgacgacgaggaggctcgcgatgccctcgaggcc
gcactcgtcgcgaatggcgcgcgtgtggcgctggcggcgtcgggcgaggatgcgattcgg
cggctggccgataccgcgccgacgcagtggccggaagtggtcgtgtgcgatgtctccctg
tgcgacgaggacggctgcgacgtactttcccgcatccgcgaggtggcgcggcaacggacc
gcgccgccgccgcccgcgatcgcgctgaccggccatgccgatgccgccacgcgtcggcgc
acggaggaagcgggctttggtgcacacctcgtgaagcccgtgcgcatcgatgcgctggct
ggggagatccgccggcttgccgcgcacgcttga
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