Trinickia caryophylli: U0034_28700
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Entry
U0034_28700 CDS
T09722
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18904
outer membrane protein, multidrug efflux system
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_28700
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_28700
BRITE hierarchy
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WQE15764
LinkDB
All DBs
Position
2:2161978..2163555
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AA seq
525 aa
AA seq
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MRPIAGIVVRTTISACRTKHGPSRAGVCAAGALAACFALASCTVGPDYRPTALPVPDAWS
SAGGQTSAGRPELARWWTRLGDPLLDALVDEAVAGNLDVASAQAKVREARAMYRQAGATM
FPALKGAVSGTRSGGASRRLSSGAPGSSSGDRSGASGSGLSAGSSELFQAGFDASWELDL
FGANRRATEAAKYGVDAAQWALMATQLTLIGDVASSYVQARGYQARLALARSTAASQQET
ARITQLRYEAGATSGLDAANATGQAQTTLAAVPALEAAYTQAVHGLSVLSGRTPEALLQR
MSEAAPLPAPRLPIAIGVPADVLLTRPDVRLAERRYAQSTARVGQAEAARYPSVNLVGSI
VTTGARPGELSRRSSIGWSFGPSITVPIFNGGRLKAGVEVARAEQDQSFVAYRQAVLIAL
KDVEDASVALSRETERIAAQQAAVASYRTSSDLAHLLYRTGATGFLEVLTAERSLYQLQD
ALIQSEVLLAVHYVALNKALGGGWDGQTDTSSSSVARPPLTNVSD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattgccgggatcgttgtgagaacaactatatcggcttgccggacgaagcac
ggcccatcgcgtgccggcgtatgcgcggcgggagccctcgcagcatgctttgcgctcgcg
agctgcaccgttggccccgattaccgtccgacggctttgcccgtacccgacgcctggtcc
tcggcgggagggcagacctcggcaggccggcccgagctcgcgcgatggtggactcggctc
ggtgatccgctgctcgacgcgctcgtcgacgaggcagtggccggcaatctcgacgttgcg
agcgcgcaggcgaaagtgcgcgaggcgcgcgcgatgtatcggcaggccggcgcaacgatg
ttccctgcgctgaagggggctgtttccgggacgcgttccggcggcgcgagccgccggctg
tcgtcgggtgctcccggcagctcgtcgggcgatcggagcggcgcgagcggatcaggcctg
tcggccggttcgagcgagctgtttcaggcgggattcgacgcgagctgggaattggacctt
ttcggcgccaaccgtcgcgcgacggaggcggcgaagtacggcgtcgacgcggcgcaatgg
gcattgatggcgacgcagcttacgttgatcggcgacgtggcgtcctcctacgtacaggcg
cgcggttaccaggcgcggcttgcgctggctcggagcactgcggcatcgcagcaggaaacc
gcgcgcatcacgcagctccggtacgaagcgggcgccacgtcagggctcgacgccgccaat
gcgacgggacaggcgcaaacgacgctcgcggcggtgccggcgctcgaggcggcctacacg
caagcggtgcacggcctttccgtgttgtcggggcgaactcccgaggcgctgctgcagcga
atgagcgaagccgcgccgcttcccgcgccacggttgcccattgccattggcgtgcccgcc
gacgtgctgctgacgcgccctgatgtgcggctggcggagcgccgatacgcgcaatccact
gcacgggtggggcaggccgaggctgcgcgttatcccagcgtcaacctcgtcggaagcatc
gtgaccacgggtgcgcggcccggcgagttgagccggcgctcgtcgatcggctggtcgttc
gggccgtccatcacggttccgattttcaacggcggcaggctcaaggcgggtgtcgaggtg
gctcgcgccgagcaggaccagtctttcgtcgcctatcgtcaggccgtcttgatcgcgctg
aaggatgtggaggatgcgagcgttgctttgtcccgggagaccgagcgcatcgcggcgcag
caggcagccgttgcgtcttatcggacgtcttcggaccttgcccacttgctgtaccggacg
ggtgcgaccggctttctcgaagtcctgaccgcggagcgctcgctctatcaactgcaggac
gcacttatccagagcgaggttttgctcgccgtccattacgtcgcgttgaacaaggcgctc
ggcggaggatgggacgggcaaacggacacgtcgagctcgagcgtcgcccgccctcctctg
acgaacgtatcggactga
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