KEGG   Trinickia caryophylli: U0034_28845
Entry
U0034_28845       CDS       T09722                                 
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
  KO
K02001  glycine betaine/proline transport system permease protein
Organism
tcar  Trinickia caryophylli
Pathway
tcar02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    U0034_28845 (choW)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tcar02000]
    U0034_28845 (choW)
Transporters [BR:tcar02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Glycine betaine/proline transporter
    U0034_28845 (choW)
SSDB
Motif
Pfam: BPD_transp_1
Other DBs
NCBI-ProteinID: WQE14666
LinkDB
Position
2:2200365..2201270
AA seq 301 aa
MSELIPLGSWVDQSVHYLLDHDSRTFDMIGRTIEGLAALVEHGLQAIPMWALMAVFIGVG
LWRVGWRFAIFTTLSLLLIYATGFWDQTVVTLGLTLSSTIISLAFGIPLGIWTAKSKHIA
LIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVVFAMPPAVRLTSLGIRHVNREI
VEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAGGLGNDVLAS
IQRLDIGLGFESGLSVVLLAIVLDRITESFGRAPGTAPAPLFKGLRSVMRVRAAQQPAAQ
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtctgaactcatcccgctcggaagctgggtcgatcaatcggtccactatctgctcgac
catgacagccgcacgttcgatatgatcggccgcacgatcgaggggctcgcggccctggtc
gagcatgggctgcaggccatcccgatgtgggcgttgatggcggttttcatcggcgtgggg
ctatggcgcgtgggctggcgcttcgcgatcttcacgacgctctcgctgctgctcatctat
gccacggggttctgggaccagacggtcgtgacactgggtctcacgctttcctcgacgatc
atcagcctcgcctttggcattccgcttggcatctggacggccaagagcaaacacatcgcg
ctcatcgtgcggccgatcctcgatctgatgcagacgatgcccgcgtttgtctatctgatc
ccggcggccatgctgttcggcctcggccgcgtgcccggcattctgtcgacggtcgttttc
gccatgccgcccgcggtgcgcctgacgagcctcggcattcgccacgtcaatcgcgagatc
gtcgaggcggggcaggcattcggctgcacgccgtggcaactgctctacaaggttcagttt
ccgaacgcgctgccgtcgatcatgcaaggtgtgaaccagacgatcatgatggcgctgtcg
atggtgatcattgcgtcgatggtcggcgcgggcgggctcggcaacgacgtgctcgcgagc
attcagcggctcgacatcgggctcggcttcgagagcggcttgtcggtcgtgctgctcgcg
atcgtgctcgaccgcattaccgagagtttcggccgtgcgccgggcaccgcgccggcgccg
ctcttcaagggcttgcgcagcgtcatgcgcgtacgggccgcccagcaaccggcggcgcag
agctga

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