Thermofilum adornatum 1505: TCARB_0042
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Entry
TCARB_0042 CDS
T03526
Name
(GenBank) Archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tcb
Thermofilum adornatum 1505
Pathway
tcb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TCARB_0042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcb03021
]
TCARB_0042
Transcription machinery [BR:
tcb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
TCARB_0042
Prokaryotic type
Archaeal type
TFE
TCARB_0042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
Zn_ribbon_ISL3
HTH_9
Zn_ribbon_3
Zn_ribbon_8
HVO_2753_ZBP
zf-HIT
HypA
Lar_restr_allev
Zn_ribbon_LysW
Zn_ribbon_TFIIB
Zn_Ribbon_1
DZR
DUF7575
DUF7129
Zn_ribbon_4
POLR3C_WHD
Zn_ribbon_IS1595
Rrf2
DUF5817
Sigma70_r3
zf-HYPF
HTH_5
TrmB
Zn_ribbon_15
FYDLN_acid
Zn_ribbon_SprT
Zn_ribbon_6
PCI
Zn_ribbon_TiaS
zf-FPG_IleRS
DUF2582
Cas12f1-like_TNB
IBR_1
MarR_2
DUF5816
zf-C2H2_3
Motif
Other DBs
NCBI-ProteinID:
AJB41120
UniProt:
A0A3G1A473
LinkDB
All DBs
Position
37868..38383
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AA seq
171 aa
AA seq
DB search
MSQNEVLAELAEKIFGEKAKKIMILLSNHVEISDDEIAKELDMDQAELRKILNDLFEARL
VKYRRARDENIGWYKYYWRITDEPLEVLLNDRKRLTLTILEKLLSLEEQAEIYVCPSCGA
RYSVVEAEDYGYTCPNCGEVLEPYDNSKRIRKIREAIQALKNYEPIASSGS
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaacgaggttttagccgaactcgcagaaaaaatatttggagaaaaagcaaaa
aagataatgatacttctctcaaaccacgtcgaaatatcggacgacgagatagccaaagaa
ctcgacatggaccaggcagagctcaggaaaattttgaacgacctattcgaggcaagactc
gtgaaatacaggcgtgcaagggacgaaaacattggatggtataagtactactggcgaata
acagatgaacccctagaagtactactcaatgataggaaaaggcttactctcactattcta
gaaaagcttctcagcctcgaggaacaggcagaaatctatgtttgcccgagctgtggagcg
cgctactctgtagtagaggccgaggactatggctacacgtgtcccaactgtggagaagtc
ctagagccatacgataattcaaagaggataagaaagatcagagaagccatccaggcattg
aaaaactacgagccaatagctagtagtggaagctaa
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