Thermofilum adornatum 1505: TCARB_0222
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Entry
TCARB_0222 CDS
T03526
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tcb
Thermofilum adornatum 1505
Pathway
tcb03410
Base excision repair
tcb03430
Mismatch repair
tcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TCARB_0222
03430 Mismatch repair
TCARB_0222
03440 Homologous recombination
TCARB_0222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcb03400
]
TCARB_0222
DNA repair and recombination proteins [BR:
tcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TCARB_0222
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TCARB_0222
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TCARB_0222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AJB41298
UniProt:
A0A3G1A5M0
LinkDB
All DBs
Position
complement(202564..203538)
Genome browser
AA seq
324 aa
AA seq
DB search
MSKPTIFISHGDLDGMSATAVIADTIRKKCPETRLIFLFSQPHELDKALLQVPEEFEELY
LVDIAIDTELWPKLSLILYEISKRGKIIWLDHHPSTLSFSDNLTKIGIQTILENMRSAAS
IARKFLQDTSDPSFYESIVKLGEASDLAIKLEKDDPLYHSLETLSIALAYKTREEQLRKK
ILSSWLNKKIIVPDEAAEAAQEGEKIYRELYQEAKQNIIFETDKLLIADLRNRRVYGFIG
RIASVLAGEKEKPVILLTRLGETATLITYRAPAKNSYEKMSKIVADIARSYGGGGGHLAA
FSYKVPSAYMENILKELIDATNSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacccacgatttttatctctcatggggaccttgacggaatgtctgctacagca
gtcatagctgacaccattagaaagaagtgtccagaaacaaggctgatatttctattttcc
cagccccacgaactcgacaaggcgctgctacaggttcccgaagaatttgaagaactctac
ctcgtcgacatagcgatcgatacagaactatggccaaaattatctcttatcctatacgag
atctcaaaaaggggaaaaataatatggctggatcatcacccgtccacgctaagtttctca
gacaatttgacaaagataggaatccaaacaatactcgaaaacatgagatcagcggcctca
atagctagaaaattccttcaggacacttctgacccttccttctacgaaagcatagtaaag
cttggagaagcatccgatctagcaataaagctggagaaagatgaccccctgtaccattcc
cttgaaacccttagcattgccctggcatacaagactcgcgaggaacagctcaggaaaaag
atactgtcgtcttggctaaacaagaaaataatagtcccagatgaggcggcagaggcggcc
caagagggagaaaaaatctacagggaattataccaggaggcaaagcaaaacataatcttt
gagacggacaagttgctgatagctgacctaagaaatagacgggtatatggattcattggg
aggattgcatctgtccttgcaggcgagaaggaaaaacccgttatcttgctgacaagactg
ggagaaacagcgacactcatcacgtatagagcgccagccaaaaacagctacgaaaagatg
tcaaagatcgttgcagacatagcgagaagctatggtggcgggggtgggcacttggcggcg
tttagctataaggttcccagcgcctacatggaaaatattctgaaagaattgatcgatgct
actaattcactttag
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integrated database retrieval system